Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UBQLN4
  • Mouse genes Ubqln4
  • Rat genes Ubqln4
  • Zfish genes ubqln4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ubqln4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042802	identical protein binding	UBQLN4	IPI	UniProtKB:Q9NRR5	Human	PMID:11001934
Molecular Function	GO:0042802	identical protein binding	UBQLN4	IPI	UniProtKB:Q9NRR5	Human	PMID:16713569
Molecular Function	GO:0042802	identical protein binding	UBQLN4	IPI	UniProtKB:Q9NRR5	Human	PMID:23459205
Molecular Function	GO:0036435	K48-linked polyubiquitin modification-dependent protein binding	UBQLN4	IDA		Human	PMID:29666234
Molecular Function	GO:0031593	polyubiquitin modification-dependent protein binding	UBQLN4	IDA		Human	PMID:15280365
Molecular Function	GO:0031593	polyubiquitin modification-dependent protein binding	UBQLN4	IPI	UniProtKB:Q6ICB0	Human	PMID:29666234
Molecular Function	GO:0031593	polyubiquitin modification-dependent protein binding	UBQLN4	IDA		Human	PMID:30612738
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:P54253	Human	PMID:11001934
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:O95201	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:P26885	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:P55198	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q13049	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q9NR12	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q9UMX0	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q9Y5P3	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q15011	Human	PMID:18307982
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:P08050	Human	PMID:20940304
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q9BXW4	Human	PMID:23459205
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q9GZQ8	Human	PMID:23459205
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q9H492	Human	PMID:23459205
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q9UHD9	Human	PMID:23459205
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q9UMX0	Human	PMID:23459205
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:P46379	Human	PMID:27113755
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:P49959	Human	PMID:30612738
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q16548	Human	PMID:34245648
Molecular Function	GO:0005515	protein binding	UBQLN4	IPI	UniProtKB:Q9HD36	Human	PMID:34245648
Cellular Component	GO:0005776	autophagosome	UBQLN4	IDA		Human	PMID:23459205
Cellular Component	GO:0005737	cytoplasm	UBQLN4	IDA		Human	PMID:11001934
Cellular Component	GO:0005737	cytoplasm	UBQLN4	IDA		Human	PMID:30612738
Cellular Component	GO:0005737	cytoplasm	UBQLN4	IDA		Human	PMID:34245648
Cellular Component	GO:0005829	cytosol	UBQLN4	IDA		Human	PMID:29666234
Cellular Component	GO:0005829	cytosol	Ubqln4	IDA		Mouse	PMID:11162551
Cellular Component	GO:0005789	endoplasmic reticulum membrane	Ubqln4	IDA		Mouse	PMID:11162551
Cellular Component	GO:0005654	nucleoplasm	UBQLN4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	UBQLN4	IDA		Human	PMID:11001934
Cellular Component	GO:0005634	nucleus	UBQLN4	IDA		Human	PMID:29666234
Cellular Component	GO:0005634	nucleus	UBQLN4	IDA		Human	PMID:30612738
Cellular Component	GO:0005634	nucleus	UBQLN4	IDA		Human	PMID:34245648
Cellular Component	GO:0032991	protein-containing complex	UBQLN4	IDA		Human	PMID:29666234
Cellular Component	GO:0090734	site of DNA damage	UBQLN4	IDA		Human	PMID:30612738
Biological Process	GO:0006974	DNA damage response	UBQLN4	IDA		Human	PMID:30612738
Biological Process	GO:1901097	negative regulation of autophagosome maturation	UBQLN4	IMP		Human	PMID:23459205
Biological Process	GO:2000042	negative regulation of double-strand break repair via homologous recombination	UBQLN4	IDA		Human	PMID:30612738
Biological Process	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	UBQLN4	IMP		Human	PMID:15280365
Biological Process	GO:0032434	regulation of proteasomal ubiquitin-dependent protein catabolic process	UBQLN4	IDA		Human	PMID:27113755

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern