Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes URM1
  • Mouse genes Urm1
  • Rat genes Urm1
  • Zfish genes urm1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Urm1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	URM1	IPI	UniProtKB:Q7Z7A3	Human	PMID:19017811
Molecular Function	GO:0005515	protein binding	URM1	IPI	UniProtKB:O95396	Human	PMID:21209336
Molecular Function	GO:0005515	protein binding	URM1	IPI	UniProtKB:P55060	Human	PMID:21209336
Molecular Function	GO:0005515	protein binding	URM1	IPI	UniProtKB:Q7Z7A3	Human	PMID:21209336
Molecular Function	GO:0005515	protein binding	URM1	IPI	UniProtKB:Q9Y4E8	Human	PMID:21209336
Molecular Function	GO:0097163	sulfur carrier activity	URM1	IDA		Human	PMID:19017811
Biological Process	GO:0034227	tRNA thio-modification	URM1	IMP		Human	PMID:19017811
Biological Process	GO:0002098	tRNA wobble uridine modification	URM1	IMP		Human	PMID:19017811

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern