Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes USP13
  • Mouse genes Usp13
  • Rat genes Usp13
  • Zfish genes usp13
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Usp13

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:1904288	BAT3 complex binding	USP13	IDA		Human	PMID:24424410
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	USP13	IDA		Human	PMID:21811243
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	USP13	IDA		Human	PMID:21962518
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	USP13	IDA		Human	PMID:22216260
Molecular Function	GO:0004843	cysteine-type deubiquitinase activity	USP13	IDA		Human	PMID:26280536
Molecular Function	GO:0004197	cysteine-type endopeptidase activity	USP13	IMP		Human	PMID:21811243
Molecular Function	GO:1990380	K48-linked deubiquitinase activity	USP13	IMP		Human	PMID:24424410
Molecular Function	GO:0070628	proteasome binding	USP13	IDA		Human	PMID:24424410
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:O75030	Human	PMID:21811243
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:Q14457	Human	PMID:21962518
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:Q969Q1	Human	PMID:31391242
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:Q9BYV6	Human	PMID:31391242
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:Q15038	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:P0DTD1:PRO_0000449630	Human	PMID:32353859
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:P54252	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:Q13148	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:P0DTD1:PRO_0000449630	Human	PMID:33060197
Molecular Function	GO:0005515	protein binding	USP13	IPI	UniProtKB:P0DTD1:PRO_0000449630	Human	PMID:33707416
Molecular Function	GO:0051087	protein-folding chaperone binding	USP13	IPI	UniProtKB:P46379	Human	PMID:24424410
Molecular Function	GO:0043130	ubiquitin binding	USP13	IDA		Human	PMID:21659512
Molecular Function	GO:0043130	ubiquitin binding	USP13	IDA		Human	PMID:21811243
Molecular Function	GO:0043130	ubiquitin binding	USP13	IDA		Human	PMID:22216260
Molecular Function	GO:0031625	ubiquitin protein ligase binding	USP13	IPI	UniProtKB:O43255	Human	PMID:21659512
Molecular Function	GO:0044389	ubiquitin-like protein ligase binding	USP13	IPI	UniProtKB:Q9UKV5	Human	PMID:24424410
Biological Process	GO:0008283	cell population proliferation	USP13	IMP		Human	PMID:21811243
Biological Process	GO:1904378	maintenance of unfolded protein involved in ERAD pathway	USP13	IMP		Human	PMID:24424410
Biological Process	GO:1904294	positive regulation of ERAD pathway	USP13	IMP		Human	PMID:24424410
Biological Process	GO:0035523	protein K29-linked deubiquitination	USP13	IDA		Human	PMID:26280536
Biological Process	GO:0044313	protein K6-linked deubiquitination	USP13	IDA		Human	PMID:26280536
Biological Process	GO:0070536	protein K63-linked deubiquitination	USP13	IDA		Human	PMID:26280536
Biological Process	GO:0070536	protein K63-linked deubiquitination	USP13	IDA		Human	PMID:22216260
Biological Process	GO:0050821	protein stabilization	USP13	IDA		Human	PMID:26280536
Biological Process	GO:0050821	protein stabilization	USP13	IMP		Human	PMID:26280536
Biological Process	GO:0050821	protein stabilization	USP13	IDA		Human	PMID:21659512
Biological Process	GO:0010506	regulation of autophagy	USP13	IDA		Human	PMID:21962518
Biological Process	GO:0006355	regulation of DNA-templated transcription	USP13	IMP		Human	PMID:21811243

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern