Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes USPL1
  • Mouse genes Uspl1
  • Rat genes Uspl1
  • Zfish genes uspl1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Uspl1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0016929	deSUMOylase activity	USPL1	IDA		Human	PMID:22878415
Molecular Function	GO:0016929	deSUMOylase activity	uspl1	IDA		Zfish	PMID:22878415|ZFIN:ZDB-PUB-120813-10
Molecular Function	GO:0005515	protein binding	USPL1	IPI	UniProtKB:P61956	Human	PMID:21988832
Molecular Function	GO:0005515	protein binding	USPL1	IPI	UniProtKB:P55854	Human	PMID:22878415
Molecular Function	GO:0005515	protein binding	USPL1	IPI	UniProtKB:P61956	Human	PMID:22878415
Molecular Function	GO:0005515	protein binding	USPL1	IPI	UniProtKB:P63165	Human	PMID:22878415
Molecular Function	GO:0005515	protein binding	USPL1	IPI	UniProtKB:P55199	Human	PMID:24413172
Molecular Function	GO:0005515	protein binding	USPL1	IPI	UniProtKB:P55854	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	uspl1	IPI	UniProtKB:P61956	Zfish	PMID:22878415|ZFIN:ZDB-PUB-120813-10
Molecular Function	GO:0032183	SUMO binding	USPL1	IDA		Human	PMID:22878415
Molecular Function	GO:0032183	SUMO binding	uspl1	IDA		Zfish	PMID:22878415|ZFIN:ZDB-PUB-120813-10
Cellular Component	GO:0015030	Cajal body	USPL1	IDA		Human	PMID:22878415
Cellular Component	GO:0015030	Cajal body	USPL1	IDA		Human	PMID:24413172
Cellular Component	GO:0015030	Cajal body	uspl1	IDA		Zfish	PMID:22878415|ZFIN:ZDB-PUB-120813-10
Cellular Component	GO:0005615	extracellular space	USPL1	HDA		Human	PMID:22664934
Biological Process	GO:0001825	blastocyst formation	Uspl1	IMP		Mouse	PMID:27869233
Biological Process	GO:0030576	Cajal body organization	USPL1	IMP		Human	PMID:22878415
Biological Process	GO:0030576	Cajal body organization	uspl1	IMP		Zfish	PMID:22878415|ZFIN:ZDB-PUB-120813-10
Biological Process	GO:0008283	cell population proliferation	USPL1	IMP		Human	PMID:22878415
Biological Process	GO:0016926	protein desumoylation	USPL1	IDA		Human	PMID:22878415
Biological Process	GO:0016926	protein desumoylation	uspl1	IDA		Zfish	PMID:22878415|ZFIN:ZDB-PUB-120813-10
Biological Process	GO:1904867	protein localization to Cajal body	uspl1	IMP	ZFIN:ZDB-GENO-121010-1	Zfish	PMID:22878415
Biological Process	GO:0009301	snRNA transcription	USPL1	IMP		Human	PMID:24413172

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern