Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UTP4
  • Mouse genes Utp4
  • Rat genes Utp4
  • Zfish genes utp4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Utp4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	UTP4	IPI	UniProtKB:P15822	Human	PMID:19732766
Molecular Function	GO:0005515	protein binding	UTP4	IPI	UniProtKB:Q15061	Human	PMID:22916032
Molecular Function	GO:0005515	protein binding	UTP4	IPI	UniProtKB:Q8TED0	Human	PMID:22916032
Molecular Function	GO:0005515	protein binding	UTP4	IPI	UniProtKB:Q9H8H0	Human	PMID:22916032
Molecular Function	GO:0005515	protein binding	UTP4	IPI	UniProtKB:Q15061	Human	PMID:24219289
Molecular Function	GO:0005515	protein binding	UTP4	IPI	UniProtKB:Q8TED0	Human	PMID:24219289
Molecular Function	GO:0005515	protein binding	UTP4	IPI	UniProtKB:Q15061	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	UTP4	IPI	UniProtKB:Q8TED0	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	UTP4	IPI	UniProtKB:Q9H8H0	Human	PMID:28514442
Molecular Function	GO:0003723	RNA binding	UTP4	HDA		Human	PMID:22658674
Cellular Component	GO:0005694	chromosome	UTP4	IDA		Human	PMID:20813266
Cellular Component	GO:0001650	fibrillar center	UTP4	IDA		Human	GO_REF:0000052
Cellular Component	GO:0001650	fibrillar center	UTP4	IDA		Human	PMID:24219289
Cellular Component	GO:0005730	nucleolus	UTP4	IDA		Human	PMID:16225863
Cellular Component	GO:0005730	nucleolus	UTP4	IDA		Human	PMID:17699751
Cellular Component	GO:0034455	t-UTP complex	UTP4	IDA		Human	PMID:22916032
Biological Process	GO:0061007	hepaticobiliary system process	utp4	IMP	ZFIN:ZDB-MRPHLNO-140114-1	Zfish	PMID:24147052
Biological Process	GO:0061007	hepaticobiliary system process	utp4	IGI	ZFIN:ZDB-GENO-100414-1,ZFIN:ZDB-MRPHLNO-140114-1	Zfish	PMID:24147052
Biological Process	GO:0061007	hepaticobiliary system process	utp4	IGI	ZFIN:ZDB-GENO-100414-1,ZFIN:ZDB-MRPHLNO-140114-2	Zfish	PMID:24147052
Biological Process	GO:0061007	hepaticobiliary system process	utp4	IMP	ZFIN:ZDB-MRPHLNO-140114-2	Zfish	PMID:24147052
Biological Process	GO:0030490	maturation of SSU-rRNA	UTP4	IMP		Human	PMID:22916032
Biological Process	GO:0006355	regulation of DNA-templated transcription	UTP4	IDA		Human	PMID:19732766

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern