Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UTRN
  • Mouse genes Utrn
  • Rat genes
  • Zfish genes utrn
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Utrn

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003779	actin binding	UTRN	IDA		Human	PMID:16803572
Molecular Function	GO:0005178	integrin binding	UTRN	IPI	UniProtKB:P05556	Human	PMID:16803572
Molecular Function	GO:0005515	protein binding	UTRN	IPI	UniProtKB:Q14118	Human	PMID:10767429
Molecular Function	GO:0005515	protein binding	UTRN	IPI	UniProtKB:Q14118:PRO_0000021066	Human	PMID:10767429
Molecular Function	GO:0005515	protein binding	UTRN	IPI	UniProtKB:Q9Y4J8	Human	PMID:10767429
Molecular Function	GO:0005515	protein binding	UTRN	IPI	UniProtKB:O15061	Human	PMID:16777071
Molecular Function	GO:0005515	protein binding	UTRN	IPI	UniProtKB:Q08209-1	Human	PMID:18838687
Molecular Function	GO:0005515	protein binding	UTRN	IPI	UniProtKB:Q9HB19	Human	PMID:19786618
Molecular Function	GO:0005515	protein binding	Utrn	IPI	UniProtKB:Q9CZA6-1	Mouse	MGI:MGI:5319752|PMID:22028625
Molecular Function	GO:0005515	protein binding	Utrn	IPI	UniProtKB:Q9QXS1	Mouse	PMID:17389230
Molecular Function	GO:0005515	protein binding	Utrn	IPI	PR:P11531	Mouse	PMID:7890770
Molecular Function	GO:0005515	protein binding	Utrn	IPI	PR:Q8BZF8	Mouse	PMID:7890770
Molecular Function	GO:0005515	protein binding	Utrn	IPI	PR:P82350	Mouse	PMID:1461282
Molecular Function	GO:0019901	protein kinase binding	UTRN	IPI	UniProtKB:Q05397	Human	PMID:16803572
Molecular Function	GO:0017166	vinculin binding	UTRN	IPI	UniProtKB:P18206	Human	PMID:16803572
Cellular Component	GO:0070938	contractile ring	UTRN	IDA		Human	PMID:16803572
Cellular Component	GO:0005737	cytoplasm	UTRN	IDA		Human	PMID:19786618
Cellular Component	GO:0016010	dystrophin-associated glycoprotein complex	Utrn	IDA		Mouse	PMID:7890770
Cellular Component	GO:0070062	extracellular exosome	UTRN	HDA		Human	PMID:19056867
Cellular Component	GO:0030175	filopodium	UTRN	IDA		Human	PMID:16803572
Cellular Component	GO:0031527	filopodium membrane	UTRN	IDA		Human	PMID:16803572
Cellular Component	GO:0031594	neuromuscular junction	Utrn	IDA		Mouse	PMID:1461282
Cellular Component	GO:0031594	neuromuscular junction	Utrn	IDA		Mouse	PMID:17119023
Cellular Component	GO:0031594	neuromuscular junction	Utrn	IDA		Mouse	PMID:9674605
Cellular Component	GO:0031594	neuromuscular junction	Utrn	IDA		Mouse	PMID:12808150
Cellular Component	GO:0005654	nucleoplasm	UTRN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	UTRN	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	UTRN	IDA		Human	PMID:18468998
Cellular Component	GO:0042383	sarcolemma	Utrn	IDA		Mouse	PMID:12808150
Cellular Component	GO:0045202	synapse	Utrn	IDA		Mouse	PMID:10995443
Biological Process	GO:0001954	positive regulation of cell-matrix adhesion	UTRN	IMP		Human	PMID:19786618

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern