Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UTY
  • Mouse genes Uty
  • Rat genes
  • Zfish genes kdm6a,kdm6al
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Uty

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051864	histone H3K36 demethylase activity	Uty	IMP		Mouse	PMID:22192413
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:P70326	Mouse	PMID:23028370
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:Q08369	Mouse	PMID:22192413
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:P70326	Mouse	PMID:22192413
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:Q9JM73	Mouse	PMID:23028370
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:Q9JM73	Mouse	PMID:22192413
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:Q3TKT4	Mouse	PMID:23028370
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:P42582	Mouse	PMID:23028370
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:P42582	Mouse	PMID:22192413
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:Q3TKT4	Mouse	PMID:22192413
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:O70546	Mouse	PMID:23028370
Molecular Function	GO:0005515	protein binding	Uty	IPI	PR:Q8BX09	Mouse	PMID:23028370
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Uty	IDA		Mouse	PMID:22949634
Cellular Component	GO:0032991	protein-containing complex	Uty	IDA		Mouse	PMID:23028370
Biological Process	GO:0009952	anterior/posterior pattern specification	kdm6al	IMP	ZFIN:ZDB-MRPHLNO-071029-3	Zfish	PMID:17851529
Biological Process	GO:0009952	anterior/posterior pattern specification	kdm6al	IMP	ZFIN:ZDB-MRPHLNO-071029-2	Zfish	PMID:17851529
Biological Process	GO:0007420	brain development	kdm6al	IMP	ZFIN:ZDB-MRPHLNO-071029-3,ZFIN:ZDB-MRPHLNO-150930-8	Zfish	PMID:25972376
Biological Process	GO:0007420	brain development	kdm6a	IMP	ZFIN:ZDB-MRPHLNO-150930-4,ZFIN:ZDB-MRPHLNO-150930-7	Zfish	PMID:25972376
Biological Process	GO:0086003	cardiac muscle cell contraction	Uty	IMP		Mouse	PMID:22192413
Biological Process	GO:0060026	convergent extension	kdm6a	IMP	ZFIN:ZDB-MRPHLNO-141121-14	Zfish	PMID:26280580
Biological Process	GO:0060027	convergent extension involved in gastrulation	kdm6a	IMP	ZFIN:ZDB-MRPHLNO-141121-14	Zfish	PMID:30018450
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	kdm6a	IMP	ZFIN:ZDB-MRPHLNO-141121-14	Zfish	PMID:30018450
Biological Process	GO:0048568	embryonic organ development	Uty	IMP	MGI:MGI:3877328	Mouse	PMID:23028370
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	kdm6a	IMP	ZFIN:ZDB-MRPHLNO-150930-4,ZFIN:ZDB-MRPHLNO-150930-7	Zfish	PMID:25972376
Biological Process	GO:0045184	establishment of protein localization	Uty	IDA		Mouse	PMID:22192413
Biological Process	GO:0060324	face development	kdm6a	IMP	ZFIN:ZDB-MRPHLNO-130521-1	Zfish	PMID:23354975
Biological Process	GO:0008354	germ cell migration	kdm6al	IMP	ZFIN:ZDB-MRPHLNO-071029-3	Zfish	PMID:23365460
Biological Process	GO:0008354	germ cell migration	kdm6a	IMP	ZFIN:ZDB-MRPHLNO-130521-1	Zfish	PMID:23365460
Biological Process	GO:0007507	heart development	Uty	IMP		Mouse	PMID:22192413
Biological Process	GO:0007507	heart development	kdm6al	IMP	ZFIN:ZDB-MRPHLNO-071029-3,ZFIN:ZDB-MRPHLNO-150930-8	Zfish	PMID:25972376
Biological Process	GO:0003007	heart morphogenesis	Uty	IMP	MGI:MGI:3877328	Mouse	PMID:23028370
Biological Process	GO:0031507	heterochromatin formation	Uty	IMP		Mouse	PMID:22192413
Biological Process	GO:0001701	in utero embryonic development	Uty	IMP	MGI:MGI:3877328	Mouse	PMID:23028370
Biological Process	GO:0001701	in utero embryonic development	Uty	IMP		Mouse	PMID:22192413
Biological Process	GO:0010468	regulation of gene expression	Uty	IMP	MGI:MGI:3877328	Mouse	PMID:23028370

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern