Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes UXT
  • Mouse genes Uxt
  • Rat genes Uxt
  • Zfish genes uxt
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Uxt

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0048487	beta-tubulin binding	UXT	IDA		Human	PMID:12762840
Molecular Function	GO:0003682	chromatin binding	UXT	IDA		Human	PMID:21730289
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:O43684	Human	PMID:12762840
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q99967	Human	PMID:12762840
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q9UNH5	Human	PMID:16221885
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q04206	Human	PMID:17620405
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q03112	Human	PMID:17635584
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q9H6T3,UniProtKB:Q9NWS0,UniProtKB:Q9Y230,UniProtKB:Q9Y265,UniProtKB:Q9Y4R8	Human	PMID:20864032
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:O94763	Human	PMID:21730289
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q0D2N8	Human	PMID:24021647
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q9H6T3	Human	PMID:25036637
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q9UHV9	Human	PMID:25036637
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:P60409	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:P60410	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q15323	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q6A162	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q7Z3S9	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q8IUQ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q9P286	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:P03372	Human	PMID:28106301
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q9UHV9	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q7Z3S9	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q9P286	Human	PMID:31515488
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:P0DPK4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:P26371	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:P60328	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:P60410	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:P63172	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q00013	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q15323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q6L8G8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	UXT	IPI	UniProtKB:Q8IUG1	Human	PMID:32296183
Molecular Function	GO:0003714	transcription corepressor activity	UXT	IDA		Human	PMID:21730289
Cellular Component	GO:0005813	centrosome	UXT	IDA		Human	PMID:16221885
Cellular Component	GO:0000785	chromatin	uxt	IDA		Zfish	PMID:25617435
Cellular Component	GO:0005737	cytoplasm	UXT	IDA		Human	PMID:21730289
Cellular Component	GO:0005856	cytoskeleton	UXT	IDA		Human	PMID:12762840
Cellular Component	GO:0005634	nucleus	UXT	IDA		Human	PMID:12762840
Cellular Component	GO:0005634	nucleus	UXT	IDA		Human	PMID:21730289
Cellular Component	GO:1990062	RPAP3/R2TP/prefoldin-like complex	UXT	IPI		Human	PMID:31738558
Biological Process	GO:0001525	angiogenesis	uxt	IMP	ZFIN:ZDB-MRPHLNO-150508-2	Zfish	PMID:25617435
Biological Process	GO:0007098	centrosome cycle	UXT	IMP		Human	PMID:16221885
Biological Process	GO:0000226	microtubule cytoskeleton organization	UXT	IMP		Human	PMID:16221885
Biological Process	GO:0045746	negative regulation of Notch signaling pathway	uxt	IMP	ZFIN:ZDB-MRPHLNO-150508-2	Zfish	PMID:25617435
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	UXT	IDA		Human	PMID:21730289

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern