Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VAMP3
  • Mouse genes Vamp3
  • Rat genes Vamp3
  • Zfish genes vamp3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vamp3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q12846	Human	PMID:12130530
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q12846	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q00610	Human	PMID:19478182
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O55012	Human	PMID:22118466
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q13492	Human	PMID:22118466
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O00161	Human	PMID:24373201
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q12846	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q9BXK5	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O00161	Human	PMID:26359495
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O43915	Human	PMID:27107012
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O94812	Human	PMID:28626000
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:P54852	Human	PMID:30614533
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:J3KQ12	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O14524-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O14684	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O14880	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O95279	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O95471	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:O95721	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:P11912	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:P21964	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:P32856-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q12846	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q13113	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q13323	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q13520	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q14973	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q15125	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q16623	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q3SXY8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q4KMG9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q53FP2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q53GL0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q53R12	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q5JX71	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q5T7V8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q6ZT21	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q86T13	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q86VR2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q8IVF2-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q8N661	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q8TAF8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q8TBP5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q8TED1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q8WZ55	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q96DZ7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q96KR6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q96Q45-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q96TC7	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q99735	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q9GZR5	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q9H5X1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q9H7M9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q9NR31	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q9NVV5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q9NY72	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q9Y282	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q9Y320	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:P61981	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q15047-2	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q8TAP4-4	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	VAMP3	IPI	UniProtKB:Q92993	Human	PMID:32814053
Molecular Function	GO:0005515	protein binding	Vamp3	IPI	UniProtKB:Q9ES83	Mouse	MGI:MGI:4431297|PMID:20057356
Molecular Function	GO:0005515	protein binding	Vamp3	IPI	PR:Q64704	Mouse	PMID:18505797
Molecular Function	GO:0005515	protein binding	Vamp3	IPI	PR:Q8C838	Mouse	PMID:26629404
Molecular Function	GO:0005515	protein binding	Vamp3	IPI	PR:P14142	Mouse	PMID:26629404
Molecular Function	GO:0005515	protein binding	Vamp3	IPI	UniProtKB:Q9ES83	Rat	PMID:20057356|RGD:8554644
Molecular Function	GO:0005515	protein binding	Vamp3	IPI	RGD:1302944	Rat	PMID:9396746|RGD:7483571
Molecular Function	GO:0000149	SNARE binding	Vamp3	IPI	RGD:3728	Rat	PMID:7698987|RGD:4892592
Molecular Function	GO:0017075	syntaxin-1 binding	Vamp3	IPI	RGD:69430	Rat	PMID:7698987|RGD:4892592
Cellular Component	GO:0016324	apical plasma membrane	Vamp3	IDA		Rat	PMID:7573412|RGD:4892574
Cellular Component	GO:0009986	cell surface	Vamp3	IDA		Mouse	MGI:MGI:5567905|PMID:21151919
Cellular Component	GO:0030136	clathrin-coated vesicle	VAMP3	IDA		Human	PMID:19478182
Cellular Component	GO:0030665	clathrin-coated vesicle membrane	Vamp3	IDA		Rat	PMID:7573412|RGD:4892574
Cellular Component	GO:0031410	cytoplasmic vesicle	Vamp3	IDA		Mouse	PMID:18505797
Cellular Component	GO:0005829	cytosol	VAMP3	IDA		Human	PMID:22589474
Cellular Component	GO:0005829	cytosol	Vamp3	IDA		Mouse	MGI:MGI:5444087|PMID:22589474
Cellular Component	GO:0005769	early endosome	Vamp3	IDA		Mouse	PMID:20847273
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	VAMP3	IDA		Human	PMID:18253931
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	Vamp3	IDA		Rat	PMID:10051443|RGD:634161
Cellular Component	GO:0043229	intracellular organelle	Vamp3	IDA		Rat	PMID:10340764|RGD:4892571
Cellular Component	GO:0097708	intracellular vesicle	Vamp3	IDA		Rat	PMID:12737809|RGD:1298908
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Vamp3	IDA		Mouse	PMID:26629404
Cellular Component	GO:0045335	phagocytic vesicle	Vamp3	IDA		Mouse	PMID:19144319
Cellular Component	GO:0005886	plasma membrane	Vamp3	IDA		Mouse	MGI:MGI:4431297|PMID:20057356
Cellular Component	GO:0005886	plasma membrane	Vamp3	IDA		Mouse	PMID:18505797
Cellular Component	GO:0005886	plasma membrane	Vamp3	IDA		Mouse	PMID:26629404
Cellular Component	GO:0005886	plasma membrane	Vamp3	IDA		Rat	PMID:10051443|RGD:634161
Cellular Component	GO:0055037	recycling endosome	VAMP3	IDA		Human	PMID:19061864
Cellular Component	GO:0055037	recycling endosome	Vamp3	IDA		Rat	PMID:10468577|RGD:4892345
Cellular Component	GO:0030141	secretory granule	Vamp3	IDA		Mouse	PMID:18321981
Cellular Component	GO:0031201	SNARE complex	VAMP3	IDA		Human	PMID:12130530
Cellular Component	GO:0031201	SNARE complex	Vamp3	IDA		Rat	PMID:10051443|RGD:634161
Cellular Component	GO:0030672	synaptic vesicle membrane	Vamp3	EXP		Rat	PMID:17110340|RGD:12050113
Cellular Component	GO:0030672	synaptic vesicle membrane	Vamp3	IDA		Rat	PMID:17110340|RGD:12050113
Biological Process	GO:0017156	calcium-ion regulated exocytosis	Vamp3	IMP	MGI:MGI:2385941	Mouse	PMID:15920476
Biological Process	GO:0071346	cellular response to type II interferon	Vamp3	IDA		Mouse	PMID:19144319
Biological Process	GO:0051649	establishment of localization in cell	Vamp3	IMP	MGI:MGI:2385941	Mouse	PMID:15920476
Biological Process	GO:0043001	Golgi to plasma membrane protein transport	Vamp3	IMP		Mouse	PMID:20582536
Biological Process	GO:1903531	negative regulation of secretion by cell	VAMP3	IDA		Human	PMID:12130530
Biological Process	GO:0001921	positive regulation of receptor recycling	Vamp3	IDA		Mouse	MGI:MGI:4431297|PMID:20057356
Biological Process	GO:0065003	protein-containing complex assembly	Vamp3	IDA		Rat	PMID:10051443|RGD:634161
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	VAMP3	IDA		Human	PMID:18195106
Biological Process	GO:0035493	SNARE complex assembly	Vamp3	IDA		Mouse	MGI:MGI:5567905|PMID:21151919
Biological Process	GO:0034446	substrate adhesion-dependent cell spreading	Vamp3	IDA		Mouse	MGI:MGI:4431297|PMID:20057356
Biological Process	GO:0016192	vesicle-mediated transport	Vamp3	IDA		Mouse	MGI:MGI:4431297|PMID:20057356

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern