Comparative GO Graph (mouse, human, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VCPKMT
  • Mouse genes Vcpkmt
  • Rat genes
  • Zfish genes vcpkmt
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vcpkmt

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0051117	ATPase binding	VCPKMT	IPI	UniProtKB:P55072	Human	PMID:23349634
Molecular Function	GO:0005515	protein binding	VCPKMT	IPI	UniProtKB:P55072	Human	PMID:22948820
Molecular Function	GO:0005515	protein binding	VCPKMT	IPI	UniProtKB:Q3KRA9	Human	PMID:22948820
Molecular Function	GO:0005515	protein binding	VCPKMT	IPI	UniProtKB:Q9BZE9	Human	PMID:23349634
Molecular Function	GO:0005515	protein binding	VCPKMT	IPI	UniProtKB:Q9BZV1	Human	PMID:23349634
Molecular Function	GO:0005515	protein binding	VCPKMT	IPI	UniProtKB:Q9H257-2	Human	PMID:32296183
Molecular Function	GO:0008276	protein methyltransferase activity	Vcpkmt	IMP		Mouse	MGI:MGI:5913147|PMID:26544960
Molecular Function	GO:0016279	protein-lysine N-methyltransferase activity	VCPKMT	IDA		Human	PMID:22948820
Molecular Function	GO:0016279	protein-lysine N-methyltransferase activity	VCPKMT	IDA		Human	PMID:23349634
Cellular Component	GO:0005737	cytoplasm	VCPKMT	IDA		Human	PMID:23349634
Cellular Component	GO:0005737	cytoplasm	Vcpkmt	IDA		Mouse	MGI:MGI:5913147|PMID:26544960
Cellular Component	GO:0005829	cytosol	VCPKMT	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	VCPKMT	IDA		Human	PMID:23349634
Biological Process	GO:0032780	negative regulation of ATP-dependent activity	VCPKMT	IMP		Human	PMID:23349634
Biological Process	GO:0018022	peptidyl-lysine methylation	VCPKMT	IMP		Human	PMID:23349634
Biological Process	GO:0018023	peptidyl-lysine trimethylation	VCPKMT	IDA		Human	PMID:22948820
Biological Process	GO:0018023	peptidyl-lysine trimethylation	Vcpkmt	IMP		Mouse	MGI:MGI:5913147|PMID:26544960

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern