Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VDAC3
  • Mouse genes Vdac3
  • Rat genes Vdac3
  • Zfish genes vdac3,zgc:56235
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vdac3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VDAC3	IPI	UniProtKB:P21796	Human	PMID:29128334
Molecular Function	GO:0005515	protein binding	VDAC3	IPI	UniProtKB:P21796	Human	PMID:30021884
Molecular Function	GO:0005515	protein binding	Vdac3	IPI	UniProtKB:Q80X86	Mouse	MGI:MGI:6507113|PMID:33536340
Molecular Function	GO:0005515	protein binding	Vdac3	IPI	UniProtKB:Q8C5Y2-1|UniProtKB:Q8C5Y2-2	Mouse	MGI:MGI:7255948|PMID:35228556
Cellular Component	GO:0070062	extracellular exosome	VDAC3	HDA		Human	PMID:19056867
Cellular Component	GO:0016020	membrane	VDAC3	IDA		Human	PMID:27641616
Cellular Component	GO:0005743	mitochondrial inner membrane	Vdac3	HDA		Mouse	PMID:12865426
Cellular Component	GO:0005739	mitochondrion	VDAC3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	VDAC3	HDA		Human	PMID:20833797
Cellular Component	GO:0005739	mitochondrion	Vdac3	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	Vdac3	HDA		Mouse	PMID:14651853
Cellular Component	GO:0005739	mitochondrion	Vdac3	IDA		Mouse	PMID:23028046
Cellular Component	GO:0005739	mitochondrion	Vdac3	IDA		Rat	PMID:14759607|RGD:10003048
Cellular Component	GO:0005634	nucleus	VDAC3	HDA		Human	PMID:21630459
Cellular Component	GO:0005791	rough endoplasmic reticulum	Vdac3	IDA		Rat	PMID:15623521|RGD:1625439
Cellular Component	GO:0045202	synapse	Vdac3	IMP	MGI:MGI:2182182	Mouse	MGI:MGI:2180416|PMID:11907043
Cellular Component	GO:0008021	synaptic vesicle	Vdac3	IDA		Rat	PMID:19187093|RGD:10003050
Biological Process	GO:0001662	behavioral fear response	Vdac3	IMP	MGI:MGI:2182182	Mouse	PMID:11907043
Biological Process	GO:0007268	chemical synaptic transmission	Vdac3	IMP	MGI:MGI:2182182	Mouse	PMID:11907043
Biological Process	GO:0031101	fin regeneration	vdac3	IEP		Zfish	PMID:22278371
Biological Process	GO:0007612	learning	Vdac3	IMP	MGI:MGI:2182182	Mouse	PMID:11907043
Biological Process	GO:0007270	neuron-neuron synaptic transmission	Vdac3	IMP	MGI:MGI:2182182	Mouse	PMID:11907043
Biological Process	GO:0120317	sperm mitochondrial sheath assembly	Vdac3	IMP		Mouse	MGI:MGI:7255948|PMID:35228556
Biological Process	GO:0007283	spermatogenesis	Vdac3	IMP		Mouse	MGI:MGI:7255948|PMID:35228556

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern