Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VGF
  • Mouse genes Vgf
  • Rat genes Vgf
  • Zfish genes si:dkey-175g6.2,vgf
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vgf

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005184	neuropeptide hormone activity	Vgf	IMP	MGI:MGI:2179681	Mouse	PMID:10433265
Cellular Component	GO:0031410	cytoplasmic vesicle	VGF	IDA		Human	PMID:17440014
Cellular Component	GO:0005615	extracellular space	VGF	IDA		Human	PMID:15706611
Cellular Component	GO:0098978	glutamatergic synapse	Vgf	EXP		Rat	PMID:14645472|RGD:2289061
Cellular Component	GO:0098978	glutamatergic synapse	Vgf	IDA		Rat	PMID:14645472|RGD:2289061
Cellular Component	GO:0005794	Golgi apparatus	VGF	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	VGF	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043005	neuron projection	Vgf	IDA		Rat	PMID:14645472|RGD:2289061
Cellular Component	GO:0043025	neuronal cell body	Vgf	IDA		Rat	PMID:14645472|RGD:2289061
Cellular Component	GO:0030667	secretory granule membrane	Vgf	IDA		Rat	PMID:16221685|RGD:2289058
Cellular Component	GO:0045202	synapse	Vgf	EXP		Rat	PMID:14720225|RGD:13702309
Cellular Component	GO:0045202	synapse	Vgf	IDA		Rat	PMID:14720225|RGD:13702309
Biological Process	GO:0006091	generation of precursor metabolites and energy	Vgf	IGI	MGI:MGI:87853	Mouse	PMID:12177191
Biological Process	GO:0006091	generation of precursor metabolites and energy	Vgf	IMP	MGI:MGI:2179681	Mouse	PMID:10433265
Biological Process	GO:0042593	glucose homeostasis	Vgf	IMP	MGI:MGI:2179681	Mouse	PMID:16141392
Biological Process	GO:0030073	insulin secretion	Vgf	IGI	MGI:MGI:104663	Mouse	PMID:16141392
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Vgf	EXP		Rat	PMID:14645472|RGD:2289061
Biological Process	GO:0050804	modulation of chemical synaptic transmission	Vgf	IDA		Rat	PMID:14645472|RGD:2289061
Biological Process	GO:0001541	ovarian follicle development	Vgf	IMP	MGI:MGI:2179681	Mouse	PMID:10433265
Biological Process	GO:0043084	penile erection	Vgf	IDA		Rat	PMID:15579158|RGD:2289065
Biological Process	GO:0048168	regulation of neuronal synaptic plasticity	Vgf	IDA		Rat	PMID:14645472|RGD:2289061
Biological Process	GO:0051591	response to cAMP	VGF	IEP		Human	PMID:10381005
Biological Process	GO:0009409	response to cold	Vgf	IDA		Mouse	PMID:16631141
Biological Process	GO:0002021	response to dietary excess	Vgf	IDA		Mouse	PMID:16631141
Biological Process	GO:0002021	response to dietary excess	Vgf	IGI	MGI:MGI:104663	Mouse	PMID:12177191
Biological Process	GO:0032868	response to insulin	Vgf	IMP	MGI:MGI:2179681	Mouse	PMID:16141392
Biological Process	GO:0019953	sexual reproduction	Vgf	IMP	MGI:MGI:2179681	Mouse	PMID:10433265
Biological Process	GO:0099538	synaptic signaling via neuropeptide	Vgf	EXP		Rat	PMID:14645472|RGD:2289061
Biological Process	GO:0099538	synaptic signaling via neuropeptide	Vgf	IDA		Rat	PMID:14645472|RGD:2289061

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern