Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VMAC
  • Mouse genes Vmac
  • Rat genes Vmac
  • Zfish genes vmac
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vmac

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q8N9N5-2	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:P24278	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:P25786	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:P25791-3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:P51504	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:P61968	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q01664	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q58EX2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q5BKZ1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q63ZY3	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q7Z5V6-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q8N9N5-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q8TAP4-4	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q8TBB1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q96IV0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q9BWG6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VMAC	IPI	UniProtKB:Q9NZD8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Vmac	IPI	RGD:735829	Rat	PMID:14985129|RGD:1303975
Cellular Component	GO:0005737	cytoplasm	Vmac	IDA		Rat	PMID:14985129|RGD:1303975
Cellular Component	GO:0045098	type III intermediate filament	Vmac	IDA		Rat	PMID:14985129|RGD:1303975

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern