Comparative GO Graph (mouse, human)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VPS13B
  • Mouse genes Vps13b
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vps13b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0032266	phosphatidylinositol-3-phosphate binding	Vps13b	IDA		Mouse	MGI:MGI:7294458|PMID:30962439
Cellular Component	GO:0002080	acrosomal membrane	Vps13b	IDA		Mouse	MGI:MGI:6467831|PMID:31218450
Cellular Component	GO:0000139	Golgi membrane	VPS13B	IDA		Human	PMID:25492866
Biological Process	GO:0001675	acrosome assembly	Vps13b	IMP		Mouse	MGI:MGI:6467831|PMID:31218450
Biological Process	GO:0060612	adipose tissue development	VPS13B	IMP		Human	PMID:26358774
Biological Process	GO:0007417	central nervous system development	Vps13b	IMP		Mouse	MGI:MGI:6393201|PMID:31495077
Biological Process	GO:0007030	Golgi organization	VPS13B	IMP		Human	PMID:25492866
Biological Process	GO:0036438	maintenance of lens transparency	Vps13b	IMP		Mouse	MGI:MGI:6455609|PMID:32915983
Biological Process	GO:0007399	nervous system development	VPS13B	IMP		Human	PMID:32560273
Biological Process	GO:0032458	slow endocytic recycling	VPS13B	IDA		Human	PMID:30962439
Biological Process	GO:0016192	vesicle-mediated transport	VPS13B	IMP		Human	PMID:32375900

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern