Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VPS33B
  • Mouse genes Vps33b
  • Rat genes Vps33b
  • Zfish genes vps33b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vps33b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:P9WIA1	Human	PMID:18474358
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:19109425
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:20190753
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:22677173
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:23901104
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:P49754	Human	PMID:23918659
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:23918659
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9P253	Human	PMID:23918659
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q15025	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q6IA61	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:25783203
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q15025	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:26871637
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:P57735	Human	PMID:28017832
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:P62491	Human	PMID:28017832
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:28017832
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:29778605
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q15025	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VPS33B	IPI	UniProtKB:Q9H9C1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Vps33b	IPI	UniProtKB:P62492	Mouse	MGI:MGI:4820693|PMID:20190753
Molecular Function	GO:0044877	protein-containing complex binding	VPS33B	IPI	GO:0030123	Human	PMID:21411634
Molecular Function	GO:0044877	protein-containing complex binding	VPS33B	IPI	GO:0071439	Human	PMID:21411634
Cellular Component	GO:0030136	clathrin-coated vesicle	VPS33B	IDA		Human	PMID:21411634
Cellular Component	GO:0005737	cytoplasm	VPS33B	IDA		Human	PMID:15052268
Cellular Component	GO:0005737	cytoplasm	VPS33B	IDA		Human	PMID:20190753
Cellular Component	GO:0031901	early endosome membrane	VPS33B	IDA		Human	PMID:21411634
Cellular Component	GO:0005768	endosome	VPS33B	IDA		Human	PMID:23918659
Cellular Component	GO:0005794	Golgi apparatus	VPS33B	IDA		Human	PMID:27435297
Cellular Component	GO:0030897	HOPS complex	VPS33B	IDA		Human	PMID:19109425
Cellular Component	GO:0005770	late endosome	VPS33B	IDA		Human	PMID:15052268
Cellular Component	GO:0005764	lysosome	VPS33B	IDA		Human	PMID:15052268
Cellular Component	GO:0048471	perinuclear region of cytoplasm	VPS33B	IDA		Human	PMID:19109425
Cellular Component	GO:0031091	platelet alpha granule	VPS33B	IDA		Human	PMID:16123220
Cellular Component	GO:0008021	synaptic vesicle	Vps33b	EXP		Rat	PMID:17110340|RGD:12050113
Cellular Component	GO:0008021	synaptic vesicle	Vps33b	IDA		Rat	PMID:17110340|RGD:12050113
Cellular Component	GO:0099023	vesicle tethering complex	VPS33B	IPI		Human	PMID:23918659
Biological Process	GO:0030199	collagen fibril organization	Vps33b	IMP	MGI:MGI:3699244,MGI:MGI:5770088	Mouse	PMID:27435297
Biological Process	GO:0032963	collagen metabolic process	VPS33B	IMP		Human	PMID:27435297
Biological Process	GO:0032963	collagen metabolic process	Vps33b	IMP	MGI:MGI:3699244,MGI:MGI:5770088	Mouse	PMID:27435297
Biological Process	GO:0007032	endosome organization	VPS33B	IMP		Human	PMID:23918659
Biological Process	GO:0006886	intracellular protein transport	Vps33b	IMP		Mouse	PMID:27435297
Biological Process	GO:0035622	intrahepatic bile duct development	vps33b	IMP	ZFIN:ZDB-MRPHLNO-051216-2	Zfish	PMID:16284120
Biological Process	GO:0035622	intrahepatic bile duct development	vps33b	IGI	ZFIN:ZDB-GENE-040426-1960	Zfish	PMID:22465374
Biological Process	GO:0035622	intrahepatic bile duct development	vps33b	IMP	ZFIN:ZDB-MRPHLNO-051216-3	Zfish	PMID:16284120
Biological Process	GO:0032418	lysosome localization	VPS33B	IDA		Human	PMID:15790593
Biological Process	GO:0035855	megakaryocyte development	Vps33b	IMP		Mouse	MGI:MGI:5645581|PMID:25947942
Biological Process	GO:0032400	melanosome localization	VPS33B	IDA		Human	PMID:15790593
Biological Process	GO:0061025	membrane fusion	VPS33B	IMP		Human	PMID:15052268
Biological Process	GO:0017185	peptidyl-lysine hydroxylation	VPS33B	IMP		Human	PMID:27435297
Biological Process	GO:0017185	peptidyl-lysine hydroxylation	Vps33b	IMP	MGI:MGI:3699244,MGI:MGI:5770088	Mouse	PMID:27435297
Biological Process	GO:0070889	platelet alpha granule organization	VPS33B	IMP		Human	PMID:16123220
Biological Process	GO:0070889	platelet alpha granule organization	Vps33b	IMP		Mouse	MGI:MGI:5645581|PMID:25947942
Biological Process	GO:0015031	protein transport	VPS33B	IMP		Human	PMID:15052268
Biological Process	GO:0090330	regulation of platelet aggregation	Vps33b	IMP		Mouse	MGI:MGI:5645581|PMID:25947942
Biological Process	GO:0043589	skin morphogenesis	VPS33B	IMP		Human	PMID:28017832
Biological Process	GO:0016192	vesicle-mediated transport	VPS33B	IDA		Human	PMID:15790593

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern