Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VPS51
  • Mouse genes Vps51
  • Rat genes Vps51
  • Zfish genes vps51
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vps51

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VPS51	IPI	UniProtKB:O43752	Human	PMID:20685960
Molecular Function	GO:0005515	protein binding	VPS51	IPI	UniProtKB:Q5VIR6	Human	PMID:20685960
Molecular Function	GO:0005515	protein binding	VPS51	IPI	UniProtKB:Q8N1B4	Human	PMID:20685960
Molecular Function	GO:0005515	protein binding	VPS51	IPI	UniProtKB:Q9P1Q0	Human	PMID:20685960
Molecular Function	GO:0005515	protein binding	VPS51	IPI	UniProtKB:Q96JG6	Human	PMID:3172165
Molecular Function	GO:0005515	protein binding	VPS51	IPI	UniProtKB:Q9P1Q0	Human	PMID:3172165
Molecular Function	GO:0005515	protein binding	Vps51	IPI	UniProtKB:Q5PPK9	Rat	PMID:27191843|RGD:11344934
Molecular Function	GO:0031267	small GTPase binding	vps51	IPI	UniProtKB:Q7ZUZ7	Zfish	PMID:20816853
Molecular Function	GO:0031267	small GTPase binding	vps51	IPI	RefSeq:NP_956287	Zfish	PMID:20816853
Molecular Function	GO:0031267	small GTPase binding	vps51	IPI	UniProtKB:Q566Z9	Zfish	PMID:20816853
Cellular Component	GO:1990745	EARP complex	VPS51	IPI		Human	PMID:25799061
Cellular Component	GO:1990745	EARP complex	VPS51	IDA		Human	PMID:25799061
Cellular Component	GO:0000938	GARP complex	VPS51	IDA		Human	PMID:20685960
Cellular Component	GO:0000938	GARP complex	VPS51	IDA		Human	PMID:25799061
Cellular Component	GO:0005794	Golgi apparatus	VPS51	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	VPS51	IDA		Human	PMID:20685960
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	VPS51	IDA		Human	GO_REF:0000052
Cellular Component	GO:0016020	membrane	VPS51	IDA		Human	PMID:25799061
Cellular Component	GO:0005730	nucleolus	VPS51	IDA		Human	GO_REF:0000052
Cellular Component	GO:0055037	recycling endosome	VPS51	IDA		Human	PMID:25799061
Cellular Component	GO:0055037	recycling endosome	Vps51	IDA		Rat	PMID:25799061|RGD:11053432
Cellular Component	GO:0005802	trans-Golgi network	Vps51	IDA		Rat	PMID:25799061|RGD:11053432
Biological Process	GO:0006914	autophagy	VPS51	IMP		Human	PMID:20685960
Biological Process	GO:0048854	brain morphogenesis	VPS51	IDA		Human	PMID:30624672
Biological Process	GO:0048854	brain morphogenesis	VPS51	IDA		Human	PMID:31207318
Biological Process	GO:0032456	endocytic recycling	VPS51	IMP		Human	PMID:25799061
Biological Process	GO:0007030	Golgi organization	vps51	IMP	ZFIN:ZDB-GENO-060602-1	Zfish	PMID:16581006
Biological Process	GO:0048193	Golgi vesicle transport	vps51	IMP	ZFIN:ZDB-GENO-060602-1,ZFIN:ZDB-MRPHLNO-060606-1	Zfish	PMID:16581006
Biological Process	GO:0044241	lipid digestion	vps51	IMP	ZFIN:ZDB-GENO-060602-1	Zfish	PMID:16581006
Biological Process	GO:0007041	lysosomal transport	VPS51	IMP		Human	PMID:25799061
Biological Process	GO:0006605	protein targeting	Vps51	IMP		Mouse	PMID:28658628
Biological Process	GO:0010517	regulation of phospholipase activity	vps51	IMP	ZFIN:ZDB-GENO-090216-1	Zfish	PMID:20816853
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	VPS51	IMP		Human	PMID:25799061
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	VPS51	IDA		Human	PMID:20685960
Biological Process	GO:0090119	vesicle-mediated cholesterol transport	Vps51	IMP		Mouse	PMID:28658628

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern