Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VSTM2L
  • Mouse genes Vstm2l
  • Rat genes Vstm2l
  • Zfish genes vstm2l
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vstm2l

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VSTM2L	IPI	UniProtKB:P54253	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	VSTM2L	IPI	UniProtKB:Q8IVG9	Human	PMID:21393573
Molecular Function	GO:0005515	protein binding	VSTM2L	IPI	UniProtKB:Q9BSQ5	Human	PMID:25814554
Molecular Function	GO:0005515	protein binding	VSTM2L	IPI	UniProtKB:P54253	Human	PMID:32814053
Cellular Component	GO:0005737	cytoplasm	VSTM2L	IDA		Human	PMID:21393573
Cellular Component	GO:0005737	cytoplasm	Vstm2l	IDA		Rat	PMID:21393573|RGD:14974247
Cellular Component	GO:0005576	extracellular region	VSTM2L	IDA		Human	PMID:21393573
Cellular Component	GO:0005576	extracellular region	Vstm2l	IDA		Mouse	MGI:MGI:5693362|PMID:21393573
Cellular Component	GO:0005576	extracellular region	Vstm2l	IDA		Rat	PMID:21393573|RGD:14974247
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	VSTM2L	IDA		Human	PMID:21393573
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	Vstm2l	IDA		Mouse	MGI:MGI:5693362|PMID:21393573
Biological Process	GO:0043524	negative regulation of neuron apoptotic process	Vstm2l	IDA		Rat	PMID:21393573|RGD:14974247
Biological Process	GO:1902869	regulation of amacrine cell differentiation	vstm2l	IMP	ZFIN:ZDB-CRISPR-221116-10	Zfish	PMID:35350973
Biological Process	GO:1902869	regulation of amacrine cell differentiation	vstm2l	IMP	ZFIN:ZDB-CRISPR-221116-9	Zfish	PMID:35350973
Biological Process	GO:1902869	regulation of amacrine cell differentiation	vstm2l	IMP	ZFIN:ZDB-MRPHLNO-221116-5	Zfish	PMID:35350973
Biological Process	GO:0036268	swimming	vstm2l	IMP	ZFIN:ZDB-CRISPR-221116-9	Zfish	PMID:35350973
Biological Process	GO:0036268	swimming	vstm2l	IMP	ZFIN:ZDB-MRPHLNO-221116-5	Zfish	PMID:35350973
Biological Process	GO:0036268	swimming	vstm2l	IMP	ZFIN:ZDB-CRISPR-221116-10	Zfish	PMID:35350973

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern