Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VSTM4
  • Mouse genes Vstm4
  • Rat genes Vstm4
  • Zfish genes vstm4a,vstm4b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vstm4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VSTM4	IPI	UniProtKB:A8MQ03	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VSTM4	IPI	UniProtKB:P22735	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VSTM4	IPI	UniProtKB:P60328	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VSTM4	IPI	UniProtKB:Q07627	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VSTM4	IPI	UniProtKB:Q16623	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VSTM4	IPI	UniProtKB:Q8IUG1	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VSTM4	IPI	UniProtKB:Q99750	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	VSTM4	IPI	UniProtKB:Q9Y680	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	Vstm4	IPI	PR:P35918	Mouse	PMID:25698653
Biological Process	GO:0043542	endothelial cell migration	Vstm4	IDA		Mouse	PMID:31698979
Biological Process	GO:0001935	endothelial cell proliferation	Vstm4	IMP		Mouse	PMID:31698979
Biological Process	GO:0097601	retina blood vessel maintenance	Vstm4	IMP	MGI:MGI:6393534	Mouse	PMID:31698979
Biological Process	GO:0061298	retina vasculature development in camera-type eye	Vstm4	IDA		Mouse	PMID:31698979
Biological Process	GO:0002040	sprouting angiogenesis	Vstm4	IDA		Mouse	PMID:31698979
Biological Process	GO:0042311	vasodilation	Vstm4	IDA		Mouse	PMID:31698979
Biological Process	GO:0042311	vasodilation	Vstm4	IMP		Mouse	PMID:31698979

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern