Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes VTI1A
  • Mouse genes Vti1a
  • Rat genes Vti1a
  • Zfish genes vti1a
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Vti1a

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	VTI1A	IPI	UniProtKB:Q86Y82	Human	PMID:24095276
Molecular Function	GO:0005515	protein binding	Vti1a	IPI	UniProtKB:Q9R0N3	Rat	PMID:24882364|RGD:8693368
Molecular Function	GO:0005484	SNAP receptor activity	VTI1A	IDA		Human	PMID:15215310
Cellular Component	GO:0005776	autophagosome	VTI1A	IDA		Human	PMID:24095276
Cellular Component	GO:0030136	clathrin-coated vesicle	Vti1a	IDA		Rat	PMID:10908612|RGD:634537
Cellular Component	GO:0005794	Golgi apparatus	VTI1A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005794	Golgi apparatus	VTI1A	IDA		Human	PMID:19224922
Cellular Component	GO:0098686	hippocampal mossy fiber to CA3 synapse	Vti1a	IDA		Rat	PMID:10908612|RGD:634537
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	VTI1A	IDA		Human	GO_REF:0000052
Cellular Component	GO:0044306	neuron projection terminus	Vti1a	IDA		Rat	PMID:10908612|RGD:634537
Cellular Component	GO:0043025	neuronal cell body	Vti1a	IDA		Rat	PMID:10908612|RGD:634537
Cellular Component	GO:0048471	perinuclear region of cytoplasm	Vti1a	IDA		Rat	PMID:10908612|RGD:634537
Cellular Component	GO:0031201	SNARE complex	Vti1a	IDA		Rat	PMID:10908612|RGD:634537
Cellular Component	GO:0031201	SNARE complex	Vti1a	IDA		Rat	PMID:16735505|RGD:4892613
Cellular Component	GO:0008021	synaptic vesicle	Vti1a	IDA		Rat	PMID:10908612|RGD:634537
Cellular Component	GO:0043195	terminal bouton	Vti1a	HDA		Rat	PMID:24876496|RGD:10047219
Biological Process	GO:0006914	autophagy	VTI1A	IMP		Human	PMID:24095276
Biological Process	GO:0032456	endocytic recycling	VTI1A	IMP		Human	PMID:23677696
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	Vti1a	IDA		Rat	PMID:16735505|RGD:4892613
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	VTI1A	IDA		Human	PMID:15215310
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	VTI1A	IDA		Human	PMID:18195106
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	VTI1A	IMP		Human	PMID:19224922
Biological Process	GO:0016189	synaptic vesicle to endosome fusion	Vti1a	IDA		Rat	PMID:17004320|RGD:12050136
Biological Process	GO:0016189	synaptic vesicle to endosome fusion	Vti1a	IMP		Rat	PMID:17004320|RGD:12050136
Biological Process	GO:0048280	vesicle fusion with Golgi apparatus	Vti1a	IDA		Rat	PMID:16735505|RGD:4892613
Biological Process	GO:0050882	voluntary musculoskeletal movement	VTI1A	IMP		Human	PMID:22958904

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern