Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes WBP4
  • Mouse genes Wbp4
  • Rat genes Wbp4
  • Zfish genes wbp4
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Wbp4

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0070064	proline-rich region binding	WBP4	IPI	UniProtKB:Q9Y2W2	Human	PMID:19592703
Molecular Function	GO:0005515	protein binding	WBP4	IPI	UniProtKB:P42858	Human	PMID:17500595
Molecular Function	GO:0005515	protein binding	WBP4	IPI	UniProtKB:O75643	Human	PMID:28838205
Molecular Function	GO:0005515	protein binding	Wbp4	IPI	PR:P27048	Mouse	PMID:9724750
Cellular Component	GO:0016607	nuclear speck	WBP4	IDA		Human	PMID:19592703
Cellular Component	GO:0005634	nucleus	WBP4	IDA		Human	PMID:28781166
Cellular Component	GO:0005681	spliceosomal complex	Wbp4	IDA		Mouse	PMID:9724750
Cellular Component	GO:0071005	U2-type precatalytic spliceosome	WBP4	IDA		Human	PMID:28781166
Biological Process	GO:0045292	mRNA cis splicing, via spliceosome	WBP4	IDA		Human	PMID:19592703
Biological Process	GO:0000398	mRNA splicing, via spliceosome	WBP4	IDA		Human	PMID:28781166

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern