Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes WNT5B
  • Mouse genes Wnt5b
  • Rat genes Wnt5b
  • Zfish genes wnt5b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Wnt5b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	Wnt5b	IPI	UniProtKB:Q9CWT0	Mouse	PMID:10866835
Molecular Function	GO:0005102	signaling receptor binding	WNT5B	IPI	UniProtKB:Q01974	Human	PMID:19486338
Molecular Function	GO:0005102	signaling receptor binding	Wnt5b	IPI	UniProtKB:Q61091	Mouse	MGI:MGI:5706913|PMID:20093360
Molecular Function	GO:0005102	signaling receptor binding	wnt5b	IPI	ZFIN:ZDB-GENE-070209-277	Zfish	PMID:20660632
Cellular Component	GO:0009986	cell surface	Wnt5b	IDA		Mouse	MGI:MGI:66576|PMID:8167409
Cellular Component	GO:0062023	collagen-containing extracellular matrix	WNT5B	HDA		Human	PMID:28327460
Cellular Component	GO:0070062	extracellular exosome	WNT5B	HDA		Human	PMID:19056867
Cellular Component	GO:0031012	extracellular matrix	Wnt5b	IDA		Mouse	PMID:8167409
Biological Process	GO:0001667	ameboidal-type cell migration	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-051207-1	Zfish	PMID:16246260
Biological Process	GO:0001525	angiogenesis	wnt5b	IMP	ZFIN:ZDB-GENO-090915-2	Zfish	PMID:18798004
Biological Process	GO:0001525	angiogenesis	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-090915-1	Zfish	PMID:18798004
Biological Process	GO:0060536	cartilage morphogenesis	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1367	Zfish	PMID:26459057
Biological Process	GO:0060536	cartilage morphogenesis	wnt5b	IMP	ZFIN:ZDB-GENO-180116-3	Zfish	PMID:27908786
Biological Process	GO:0042074	cell migration involved in gastrulation	wnt5b	IGI	ZFIN:ZDB-MRPHLNO-041217-10,ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:17032765
Biological Process	GO:0042074	cell migration involved in gastrulation	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:16019189
Biological Process	GO:0002062	chondrocyte differentiation	WNT5B	IEP		Human	PMID:15135146
Biological Process	GO:0002062	chondrocyte differentiation	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1366	Zfish	PMID:9007254
Biological Process	GO:0002062	chondrocyte differentiation	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1002	Zfish	PMID:9007254
Biological Process	GO:0002062	chondrocyte differentiation	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1370	Zfish	PMID:9007254
Biological Process	GO:0002062	chondrocyte differentiation	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1367	Zfish	PMID:9007254
Biological Process	GO:0060026	convergent extension	wnt5b	IGI	ZFIN:ZDB-GENO-080222-3,ZFIN:ZDB-MRPHLNO-060126-1	Zfish	PMID:17906624
Biological Process	GO:0060026	convergent extension	wnt5b	IGI	ZFIN:ZDB-GENO-080222-3,ZFIN:ZDB-MRPHLNO-060208-1	Zfish	PMID:17906624
Biological Process	GO:0060026	convergent extension	wnt5b	IGI	ZFIN:ZDB-GENO-080222-3,ZFIN:ZDB-MRPHLNO-060208-2	Zfish	PMID:17906624
Biological Process	GO:0060028	convergent extension involved in axis elongation	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-090915-1	Zfish	PMID:20660632
Biological Process	GO:0060028	convergent extension involved in axis elongation	wnt5b	IGI	ZFIN:ZDB-MRPHLNO-090915-1,ZFIN:ZDB-MRPHLNO-100805-1	Zfish	PMID:20660632
Biological Process	GO:0060028	convergent extension involved in axis elongation	wnt5b	IGI	ZFIN:ZDB-GENE-030827-4	Zfish	PMID:22100263
Biological Process	GO:0060028	convergent extension involved in axis elongation	wnt5b	IGI	ZFIN:ZDB-GENO-080512-4	Zfish	PMID:14660439
Biological Process	GO:0060027	convergent extension involved in gastrulation	wnt5b	IGI	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:25183869
Biological Process	GO:0060027	convergent extension involved in gastrulation	wnt5b	IGI	ZFIN:ZDB-MRPHLNO-041217-11,ZFIN:ZDB-MRPHLNO-120614-3	Zfish	PMID:22357957
Biological Process	GO:0060027	convergent extension involved in gastrulation	wnt5b	IGI	ZFIN:ZDB-MRPHLNO-041217-11,ZFIN:ZDB-MRPHLNO-080801-1	Zfish	PMID:18159945
Biological Process	GO:0060027	convergent extension involved in gastrulation	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:18159945
Biological Process	GO:0060027	convergent extension involved in gastrulation	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:12676324
Biological Process	GO:0060027	convergent extension involved in gastrulation	wnt5b	IGI	ZFIN:ZDB-MRPHLNO-041217-11,ZFIN:ZDB-MRPHLNO-050128-3,ZFIN:ZDB-MRPHLNO-070304-3	Zfish	PMID:15815683
Biological Process	GO:0060027	convergent extension involved in gastrulation	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:15815683
Biological Process	GO:0060027	convergent extension involved in gastrulation	wnt5b	IMP	ZFIN:ZDB-GENO-100614-2	Zfish	PMID:12676324
Biological Process	GO:0060030	dorsal convergence	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-090915-1,ZFIN:ZDB-MRPHLNO-100805-1	Zfish	PMID:20660632
Biological Process	GO:0010172	embryonic body morphogenesis	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1367	Zfish	PMID:9598355
Biological Process	GO:0010172	embryonic body morphogenesis	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1371	Zfish	PMID:9598355
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1367	Zfish	PMID:9007236
Biological Process	GO:0048703	embryonic viscerocranium morphogenesis	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1370	Zfish	PMID:25934698
Biological Process	GO:0001958	endochondral ossification	wnt5b	IMP	ZFIN:ZDB-GENO-180116-3	Zfish	PMID:27908786
Biological Process	GO:0031018	endocrine pancreas development	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-051207-1	Zfish	PMID:16246260
Biological Process	GO:0031101	fin regeneration	wnt5b	IMP		Zfish	PMID:19445916
Biological Process	GO:0031101	fin regeneration	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1367	Zfish	PMID:17185322
Biological Process	GO:0090156	intracellular sphingolipid homeostasis	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:32620775
Biological Process	GO:0001946	lymphangiogenesis	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:25992545
Biological Process	GO:0001946	lymphangiogenesis	wnt5b	IMP	ZFIN:ZDB-GENO-151110-11	Zfish	PMID:25992545
Biological Process	GO:0021555	midbrain-hindbrain boundary morphogenesis	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-051207-1	Zfish	PMID:30305282
Biological Process	GO:0021555	midbrain-hindbrain boundary morphogenesis	wnt5b	IGI	ZFIN:ZDB-GENE-020114-1	Zfish	PMID:30305282
Biological Process	GO:0042692	muscle cell differentiation	wnt5b	IMP		Zfish	PMID:22406073|ZFIN:ZDB-PUB-120314-20
Biological Process	GO:0090090	negative regulation of canonical Wnt signaling pathway	Wnt5b	IGI	MGI:MGI:98956	Mouse	PMID:15796911
Biological Process	GO:0048884	neuromast development	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:22308195
Biological Process	GO:0001503	ossification	wnt5b	IMP	ZFIN:ZDB-GENO-180116-3	Zfish	PMID:27908786
Biological Process	GO:0048840	otolith development	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:22308195
Biological Process	GO:0030335	positive regulation of cell migration	WNT5B	IDA		Human	PMID:19486338
Biological Process	GO:1904105	positive regulation of convergent extension involved in gastrulation	wnt5b	IMP		Zfish	PMID:22406073|ZFIN:ZDB-PUB-120314-20
Biological Process	GO:0045600	positive regulation of fat cell differentiation	Wnt5b	IGI	MGI:MGI:98956	Mouse	PMID:15796911
Biological Process	GO:2000052	positive regulation of non-canonical Wnt signaling pathway	wnt5b	IMP		Zfish	PMID:22406073|ZFIN:ZDB-PUB-120314-20
Biological Process	GO:1904222	positive regulation of serine C-palmitoyltransferase activity	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:32620775
Biological Process	GO:0036342	post-anal tail morphogenesis	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1367	Zfish	PMID:9007236
Biological Process	GO:0008591	regulation of Wnt signaling pathway, calcium modulating pathway	wnt5b	IGI	ZFIN:ZDB-MRPHLNO-110523-7	Zfish	PMID:20628572
Biological Process	GO:0008591	regulation of Wnt signaling pathway, calcium modulating pathway	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-090915-1	Zfish	PMID:20628572
Biological Process	GO:0051209	release of sequestered calcium ion into cytosol	wnt5b	IDA		Zfish	PMID:20660632
Biological Process	GO:0001501	skeletal system development	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1371	Zfish	PMID:9598355
Biological Process	GO:0001501	skeletal system development	wnt5b	IMP	ZFIN:ZDB-GENO-980202-1367	Zfish	PMID:9598355
Biological Process	GO:0061053	somite development	wnt5b	IGI	ZFIN:ZDB-MRPHLNO-110523-7	Zfish	PMID:20628572
Biological Process	GO:0002574	thrombocyte differentiation	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:22308195
Biological Process	GO:0009826	unidimensional cell growth	wnt5b	IMP	ZFIN:ZDB-MRPHLNO-041217-11	Zfish	PMID:12676324
Biological Process	GO:0009826	unidimensional cell growth	wnt5b	IMP	ZFIN:ZDB-GENO-100614-2	Zfish	PMID:12676324
Biological Process	GO:0007223	Wnt signaling pathway, calcium modulating pathway	wnt5b	IGI	ZFIN:ZDB-MRPHLNO-051207-1,ZFIN:ZDB-MRPHLNO-051207-2,ZFIN:ZDB-MRPHLNO-051207-3	Zfish	PMID:16246260
Biological Process	GO:0007223	Wnt signaling pathway, calcium modulating pathway	wnt5b	IDA		Zfish	PMID:20660632
Biological Process	GO:0042060	wound healing	Wnt5b	IEP		Rat	PMID:17001188|RGD:2317897

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern