Comparative GO Graph (mouse, human)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes XIST
  • Mouse genes Xist
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Xist

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0043021	ribonucleoprotein complex binding	Xist	IDA		Mouse	PMID:21172659
Cellular Component	GO:0005694	chromosome	Xist	IDA		Mouse	PMID:12419249
Cellular Component	GO:0016604	nuclear body	Xist	IDA		Mouse	PMID:25145264
Cellular Component	GO:0005634	nucleus	Xist	IDA		Mouse	PMID:22482507
Cellular Component	GO:0005634	nucleus	Xist	IDA		Mouse	PMID:24268575
Cellular Component	GO:0005634	nucleus	Xist	IDA		Mouse	PMID:22573614
Cellular Component	GO:0000805	X chromosome	Xist	IDA		Mouse	PMID:24613346
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	Xist	IMP	MGI:MGI:2445460	Mouse	PMID:22573614
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	Xist	IMP	MGI:MGI:2445459	Mouse	PMID:24613346
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	Xist	IDA		Mouse	PMID:27892467
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	Xist	IDA		Mouse	PMID:12419249
Biological Process	GO:0009048	dosage compensation by inactivation of X chromosome	Xist	IGI	MGI:MGI:1336196	Mouse	PMID:15992549
Biological Process	GO:0060819	inactivation of X chromosome by genomic imprinting	Xist	IMP		Mouse	PMID:23658530
Biological Process	GO:0060708	spongiotrophoblast differentiation	Xist	IMP	MGI:MGI:2445460	Mouse	PMID:22573614

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern