Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes XYLT1
  • Mouse genes Xylt1
  • Rat genes Xylt1
  • Zfish genes xylt1
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Xylt1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0030158	protein xylosyltransferase activity	XYLT1	IDA		Human	PMID:11087729
Molecular Function	GO:0030158	protein xylosyltransferase activity	XYLT1	IDA		Human	PMID:17189265
Molecular Function	GO:0030158	protein xylosyltransferase activity	XYLT1	IDA		Human	PMID:29681470
Molecular Function	GO:0030158	protein xylosyltransferase activity	Xylt1	IDA		Mouse	MGI:MGI:5544658|PMID:24161523
Molecular Function	GO:0030158	protein xylosyltransferase activity	Xylt1	IMP	MGI:MGI:5563785	Mouse	PMID:24161523
Molecular Function	GO:0030158	protein xylosyltransferase activity	Xylt1	IDA		Mouse	PMID:19389916
Cellular Component	GO:0005615	extracellular space	XYLT1	IDA		Human	PMID:11087729
Cellular Component	GO:0005794	Golgi apparatus	Xylt1	IDA		Mouse	PMID:24161523
Cellular Component	GO:0000137	Golgi cis cisterna	Xylt1	IDA		Mouse	MGI:MGI:5544658|PMID:24161523
Cellular Component	GO:0000139	Golgi membrane	XYLT1	IDA		Human	PMID:16571645
Biological Process	GO:0034605	cellular response to heat	Xylt1	IDA		Mouse	PMID:18755693
Biological Process	GO:0030206	chondroitin sulfate biosynthetic process	Xylt1	IMP		Mouse	MGI:MGI:5544658|PMID:24161523
Biological Process	GO:0050650	chondroitin sulfate proteoglycan biosynthetic process	XYLT1	IMP		Human	PMID:17189265
Biological Process	GO:0048701	embryonic cranial skeleton morphogenesis	xylt1	IMP	ZFIN:ZDB-GENO-111017-5	Zfish	PMID:21901110
Biological Process	GO:0048706	embryonic skeletal system development	Xylt1	IMP		Mouse	MGI:MGI:5544658|PMID:24161523
Biological Process	GO:0006024	glycosaminoglycan biosynthetic process	Xylt1	IMP	MGI:MGI:5563785	Mouse	PMID:24161523
Biological Process	GO:0015012	heparan sulfate proteoglycan biosynthetic process	XYLT1	IMP		Human	PMID:17189265
Biological Process	GO:0048681	negative regulation of axon regeneration	Xylt1	IMP		Rat	PMID:18765417|RGD:2313145
Biological Process	GO:0043931	ossification involved in bone maturation	Xylt1	IMP		Mouse	MGI:MGI:5544658|PMID:24161523
Biological Process	GO:0030166	proteoglycan biosynthetic process	XYLT1	IDA		Human	PMID:11087729
Biological Process	GO:0030166	proteoglycan biosynthetic process	Xylt1	IMP		Rat	PMID:19001053|RGD:2313142
Biological Process	GO:0030166	proteoglycan biosynthetic process	xylt1	IMP	ZFIN:ZDB-GENO-111017-5	Zfish	PMID:21901110
Biological Process	GO:0070555	response to interleukin-1	Xylt1	IEP		Rat	PMID:19001053|RGD:2313142

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern