Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes YIF1B
  • Mouse genes Yif1b
  • Rat genes Yif1b
  • Zfish genes yif1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Yif1b

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	YIF1B	IPI	UniProtKB:O15354	Human	PMID:28298427
Molecular Function	GO:0005515	protein binding	YIF1B	IPI	UniProtKB:Q9NP78	Human	PMID:30877195
Molecular Function	GO:0005515	protein binding	Yif1b	IPI	UniProtKB:P19327	Rat	PMID:18685031|RGD:21201278
Cellular Component	GO:0005783	endoplasmic reticulum	YIF1B	IDA		Human	PMID:26077767
Cellular Component	GO:0005783	endoplasmic reticulum	Yif1b	IDA		Mouse	MGI:MGI:6393020|PMID:26077767
Cellular Component	GO:0005783	endoplasmic reticulum	Yif1b	IDA		Rat	PMID:26077767|RGD:11342577
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	YIF1B	IDA		Human	PMID:26077767
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Yif1b	IDA		Mouse	MGI:MGI:6393020|PMID:26077767
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Yif1b	IDA		Rat	PMID:18685031|RGD:21201278
Cellular Component	GO:0005793	endoplasmic reticulum-Golgi intermediate compartment	Yif1b	IDA		Rat	PMID:26077767|RGD:11342577
Cellular Component	GO:0005794	Golgi apparatus	YIF1B	IDA		Human	PMID:26077767
Cellular Component	GO:0005794	Golgi apparatus	Yif1b	IDA		Mouse	MGI:MGI:6393020|PMID:26077767
Cellular Component	GO:0005794	Golgi apparatus	Yif1b	IDA		Rat	PMID:26077767|RGD:11342577
Biological Process	GO:0060271	cilium assembly	Yif1b	IMP		Mouse	MGI:MGI:6718237|PMID:33103737
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	YIF1B	IMP		Human	PMID:33103737
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	Yif1b	IMP		Mouse	MGI:MGI:6718237|PMID:33103737
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	Yif1b	IMP		Mouse	MGI:MGI:6393020|PMID:26077767
Biological Process	GO:0006612	protein targeting to membrane	Yif1b	IMP		Mouse	MGI:MGI:6393020|PMID:26077767
Biological Process	GO:0120316	sperm flagellum assembly	Yif1b	IMP		Mouse	MGI:MGI:6718237|PMID:33103737

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern