Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes YIPF5
  • Mouse genes Yipf5
  • Rat genes Yipf5
  • Zfish genes yipf5
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Yipf5

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	YIPF5	IPI	UniProtKB:O95070	Human	PMID:23736259
Molecular Function	GO:0005515	protein binding	YIPF5	IPI	UniProtKB:O75460	Human	PMID:25742138
Molecular Function	GO:0005515	protein binding	YIPF5	IPI	UniProtKB:O95070	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	YIPF5	IPI	UniProtKB:O95070	Human	PMID:32296183
Cellular Component	GO:0030134	COPII-coated ER to Golgi transport vesicle	Yipf5	IDA		Mouse	PMID:11489904
Cellular Component	GO:0005783	endoplasmic reticulum	YIPF5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0070971	endoplasmic reticulum exit site	Yipf5	IDA		Mouse	PMID:11489904
Cellular Component	GO:0005794	Golgi apparatus	YIPF5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043231	intracellular membrane-bounded organelle	YIPF5	IDA		Human	GO_REF:0000052
Cellular Component	GO:0042175	nuclear outer membrane-endoplasmic reticulum membrane network	Yipf5	IDA		Mouse	PMID:15254263
Cellular Component	GO:0005654	nucleoplasm	YIPF5	IDA		Human	GO_REF:0000052
Biological Process	GO:0030070	insulin processing	YIPF5	IMP		Human	PMID:33164986
Biological Process	GO:0060628	regulation of ER to Golgi vesicle-mediated transport	YIPF5	IMP		Human	PMID:33164986
Biological Process	GO:0060628	regulation of ER to Golgi vesicle-mediated transport	Yipf5	IMP		Mouse	PMID:11489904

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern