Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes YKT6
  • Mouse genes Ykt6
  • Rat genes Ykt6
  • Zfish genes ykt6
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Ykt6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0045296	cadherin binding	YKT6	HDA		Human	PMID:25468996
Molecular Function	GO:0019706	protein-cysteine S-palmitoyltransferase activity	YKT6	IDA		Human	PMID:15479160
Molecular Function	GO:0005484	SNAP receptor activity	YKT6	IDA		Human	PMID:15215310
Cellular Component	GO:0097440	apical dendrite	Ykt6	IDA		Rat	PMID:12589064|RGD:10003110
Cellular Component	GO:0097441	basal dendrite	Ykt6	IDA		Rat	PMID:12589064|RGD:10003110
Cellular Component	GO:0005737	cytoplasm	YKT6	IDA		Human	PMID:25468996
Cellular Component	GO:0005737	cytoplasm	Ykt6	IDA		Rat	PMID:15331663|RGD:10003111
Cellular Component	GO:0005829	cytosol	YKT6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005783	endoplasmic reticulum	YKT6	IDA		Human	PMID:9211930
Cellular Component	GO:0005768	endosome	YKT6	IDA		Human	PMID:15215310
Cellular Component	GO:0005794	Golgi apparatus	YKT6	IDA		Human	PMID:15215310
Cellular Component	GO:0016020	membrane	Ykt6	IDA		Rat	PMID:22443861|RGD:10003109
Cellular Component	GO:0005739	mitochondrion	YKT6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0043025	neuronal cell body	Ykt6	IDA		Rat	PMID:12589064|RGD:10003110
Cellular Component	GO:0005886	plasma membrane	YKT6	IDA		Human	PMID:9211930
Cellular Component	GO:0031201	SNARE complex	Ykt6	IDA		Rat	PMID:16598260|RGD:8553500
Biological Process	GO:0006888	endoplasmic reticulum to Golgi vesicle-mediated transport	YKT6	IDA		Human	PMID:9211930
Biological Process	GO:0042147	retrograde transport, endosome to Golgi	YKT6	IDA		Human	PMID:15215310
Biological Process	GO:0006904	vesicle docking involved in exocytosis	YKT6	IDA		Human	PMID:9211930
Biological Process	GO:0006903	vesicle targeting	YKT6	IDA		Human	PMID:9211930

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern