Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes YME1L1
  • Mouse genes Yme1l1
  • Rat genes Yme1l1
  • Zfish genes yme1l1a,yme1l1b
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Yme1l1

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0004176	ATP-dependent peptidase activity	YME1L1	IMP		Human	PMID:27495975
Molecular Function	GO:0004176	ATP-dependent peptidase activity	YME1L1	IDA		Human	PMID:27786171
Molecular Function	GO:0004176	ATP-dependent peptidase activity	Yme1l1	IMP		Mouse	MGI:MGI:5796893|PMID:27495975
Molecular Function	GO:0005515	protein binding	YME1L1	IPI	UniProtKB:Q8WV93	Human	PMID:26759378
Cellular Component	GO:0016020	membrane	YME1L1	HDA		Human	PMID:19946888
Cellular Component	GO:0005743	mitochondrial inner membrane	YME1L1	IDA		Human	PMID:22262461
Cellular Component	GO:0005739	mitochondrion	YME1L1	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005739	mitochondrion	YME1L1	IDA		Human	PMID:27495975
Cellular Component	GO:0005739	mitochondrion	Yme1l1	HDA		Mouse	PMID:18614015
Cellular Component	GO:0016604	nuclear body	YME1L1	IDA		Human	GO_REF:0000052
Biological Process	GO:0008283	cell population proliferation	YME1L1	IMP		Human	PMID:22262461
Biological Process	GO:0035694	mitochondrial protein catabolic process	YME1L1	IMP		Human	PMID:27495975
Biological Process	GO:0035694	mitochondrial protein catabolic process	YME1L1	IMP		Human	PMID:27786171
Biological Process	GO:0034982	mitochondrial protein processing	YME1L1	IMP		Human	PMID:27495975
Biological Process	GO:0034982	mitochondrial protein processing	Yme1l1	IMP		Mouse	MGI:MGI:5796893|PMID:27495975
Biological Process	GO:0007005	mitochondrion organization	YME1L1	IMP		Human	PMID:22262461
Biological Process	GO:0007005	mitochondrion organization	YME1L1	IMP		Human	PMID:27495975
Biological Process	GO:0043066	negative regulation of apoptotic process	YME1L1	IMP		Human	PMID:22262461
Biological Process	GO:0034214	protein hexamerization	YME1L1	IDA		Human	PMID:27786171
Biological Process	GO:0006515	protein quality control for misfolded or incompletely synthesized proteins	YME1L1	IMP		Human	PMID:22262461

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern