Comparative GO Graph (mouse, human)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZBED6
  • Mouse genes Zbed6
  • Rat genes
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zbed6

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	Zbed6	IDA		Mouse	MGI:MGI:4421252|PMID:20016685
Molecular Function	GO:0000976	transcription cis-regulatory region binding	Zbed6	IDA		Mouse	MGI:MGI:4421252|PMID:20016685
Molecular Function	GO:0000976	transcription cis-regulatory region binding	Zbed6	IDA		Mouse	MGI:MGI:6120647|PMID:29440408
Cellular Component	GO:0034451	centriolar satellite	ZBED6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005737	cytoplasm	ZBED6	IDA		Human	PMID:24043816
Cellular Component	GO:0005737	cytoplasm	Zbed6	IDA		Mouse	MGI:MGI:6467708|PMID:32557799
Cellular Component	GO:0005737	cytoplasm	Zbed6	IDA		Mouse	MGI:MGI:5511070|PMID:24043816
Cellular Component	GO:0005737	cytoplasm	Zbed6	IDA		Mouse	MGI:MGI:6216737|PMID:26750727
Cellular Component	GO:0005730	nucleolus	Zbed6	IDA		Mouse	MGI:MGI:4421252|PMID:20016685
Cellular Component	GO:0005654	nucleoplasm	ZBED6	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ZBED6	IDA		Human	PMID:24043816
Cellular Component	GO:0005634	nucleus	Zbed6	IDA		Mouse	MGI:MGI:6467708|PMID:32557799
Cellular Component	GO:0005634	nucleus	Zbed6	IDA		Mouse	MGI:MGI:6216737|PMID:26750727
Cellular Component	GO:0005634	nucleus	Zbed6	IDA		Mouse	MGI:MGI:4421252|PMID:20016685
Biological Process	GO:0001835	blastocyst hatching	Zbed6	IMP		Mouse	PMID:27869233
Biological Process	GO:0060548	negative regulation of cell death	Zbed6	IMP		Mouse	MGI:MGI:5511070|PMID:24043816
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Zbed6	IMP		Mouse	MGI:MGI:4421252|PMID:20016685
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	Zbed6	IMP		Mouse	MGI:MGI:4453828|PMID:20134481
Biological Process	GO:0051148	negative regulation of muscle cell differentiation	Zbed6	IMP		Mouse	MGI:MGI:6467708|PMID:32557799
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Zbed6	IDA		Mouse	MGI:MGI:5511070|PMID:24043816
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Zbed6	IMP		Mouse	MGI:MGI:6120647|PMID:29440408
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Zbed6	IDA		Mouse	MGI:MGI:6216737|PMID:26750727
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Zbed6	IDA		Mouse	MGI:MGI:4421252|PMID:20016685
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Zbed6	IDA		Mouse	PMID:20134481
Biological Process	GO:0045787	positive regulation of cell cycle	ZBED6	IMP		Human	PMID:24043816
Biological Process	GO:0045787	positive regulation of cell cycle	Zbed6	IMP		Mouse	MGI:MGI:5511070|PMID:24043816
Biological Process	GO:0061178	regulation of insulin secretion involved in cellular response to glucose stimulus	Zbed6	IMP		Mouse	MGI:MGI:6120647|PMID:29440408
Biological Process	GO:0003309	type B pancreatic cell differentiation	Zbed6	IMP		Mouse	MGI:MGI:5511070|PMID:24043816

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern