Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZC3H18
  • Mouse genes Zc3h18
  • Rat genes Zc3h18
  • Zfish genes zc3h18
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zc3h18

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0140262	mRNA cap binding complex binding	ZC3H18	IDA		Human	PMID:28297668
Molecular Function	GO:0005515	protein binding	ZC3H18	IPI	UniProtKB:Q15554	Human	PMID:21044950
Molecular Function	GO:0005515	protein binding	ZC3H18	IPI	UniProtKB:P52298,UniProtKB:Q09161	Human	PMID:23793891
Molecular Function	GO:0005515	protein binding	ZC3H18	IPI	UniProtKB:O60293	Human	PMID:27871484
Molecular Function	GO:0030674	protein-macromolecule adaptor activity	ZC3H18	IDA		Human	PMID:28297668
Molecular Function	GO:0003723	RNA binding	ZC3H18	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	ZC3H18	HDA		Human	PMID:22681889
Cellular Component	GO:0016607	nuclear speck	ZC3H18	IDA		Human	GO_REF:0000052
Cellular Component	GO:0032991	protein-containing complex	ZC3H18	IDA		Human	PMID:23793891
Cellular Component	GO:1990904	ribonucleoprotein complex	ZC3H18	IDA		Human	PMID:28297668
Biological Process	GO:0050779	RNA destabilization	ZC3H18	IMP		Human	PMID:28297668

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern