Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZCCHC8
  • Mouse genes Zcchc8
  • Rat genes Zcchc8
  • Zfish genes zcchc8
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zcchc8

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:P42285	Human	PMID:16263084
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:P42285|UniProtKB:Q9Y580	Human	PMID:16263084
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:Q9Y580	Human	PMID:16263084
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:P38398	Human	PMID:17525332
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:Q9CQT2	Human	PMID:25525152
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:Q9Y580	Human	PMID:25578728
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:Q9Y580	Human	PMID:26496610
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:Q9Y580	Human	PMID:27871484
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:P42285	Human	PMID:27905398
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:Q9Y580	Human	PMID:27905398
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:Q9Y580	Human	PMID:28514442
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:P42285	Human	PMID:29844170
Molecular Function	GO:0005515	protein binding	ZCCHC8	IPI	UniProtKB:P42285	Human	PMID:31358741
Molecular Function	GO:0003723	RNA binding	ZCCHC8	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	ZCCHC8	IDA		Human	PMID:31488579
Cellular Component	GO:0071013	catalytic step 2 spliceosome	ZCCHC8	IDA		Human	PMID:11991638
Cellular Component	GO:0016604	nuclear body	ZCCHC8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	ZCCHC8	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	ZCCHC8	IDA		Human	PMID:16263084
Cellular Component	GO:0005634	nucleus	ZCCHC8	IDA		Human	PMID:21855801
Cellular Component	GO:0031499	TRAMP complex	ZCCHC8	IDA		Human	PMID:21855801
Biological Process	GO:0034470	ncRNA processing	ZCCHC8	IMP		Human	PMID:31488579

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern