Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZNF148
  • Mouse genes Zfp148
  • Rat genes Zfp148
  • Zfish genes znf148
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zfp148

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0003700	DNA-binding transcription factor activity	Zfp148	IDA		Mouse	PMID:9030551
Molecular Function	GO:0001227	DNA-binding transcription repressor activity, RNA polymerase II-specific	ZNF148	IDA		Human	PMID:12771217
Molecular Function	GO:0003690	double-stranded DNA binding	Zfp148	IDA		Rat	PMID:8943318|RGD:61784
Molecular Function	GO:0005515	protein binding	ZNF148	IPI	UniProtKB:P08047	Human	PMID:12771217
Molecular Function	GO:0005515	protein binding	ZNF148	IPI	UniProtKB:B7ZLH0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZNF148	IPI	UniProtKB:O76003	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZNF148	IPI	UniProtKB:Q05D60	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZNF148	IPI	UniProtKB:Q15323	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZNF148	IPI	UniProtKB:Q8IUQ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZNF148	IPI	UniProtKB:Q8NHQ1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZNF148	IPI	UniProtKB:Q9H8Y8	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZNF148	IPI	UniProtKB:Q9UDY6	Human	PMID:25416956
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	ZNF148	IDA		Human	PMID:12771217
Molecular Function	GO:0000978	RNA polymerase II cis-regulatory region sequence-specific DNA binding	Zfp148	IDA		Mouse	PMID:9030551
Molecular Function	GO:0043565	sequence-specific DNA binding	ZNF148	IDA		Human	PMID:12771217
Molecular Function	GO:0000976	transcription cis-regulatory region binding	Zfp148	IDA		Rat	PMID:8943318|RGD:61784
Cellular Component	GO:0005794	Golgi apparatus	ZNF148	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	ZNF148	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	Zfp148	IDA		Mouse	PMID:12524542
Cellular Component	GO:0005634	nucleus	Zfp148	IDA		Rat	PMID:8943318|RGD:61784
Biological Process	GO:0007276	gamete generation	Zfp148	IMP	MGI:MGI:3040891	Mouse	PMID:12524542
Biological Process	GO:0030097	hemopoiesis	znf148	IMP	ZFIN:ZDB-MRPHLNO-071227-2	Zfish	PMID:16914492
Biological Process	GO:0030097	hemopoiesis	znf148	IMP	ZFIN:ZDB-MRPHLNO-071227-1	Zfish	PMID:16914492
Biological Process	GO:0030097	hemopoiesis	znf148	IMP	ZFIN:ZDB-MRPHLNO-081114-2	Zfish	PMID:18250154
Biological Process	GO:0045892	negative regulation of DNA-templated transcription	ZNF148	IDA		Human	PMID:12771217
Biological Process	GO:0010629	negative regulation of gene expression	ZNF148	IDA		Human	PMID:12771217
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ZNF148	IDA		Human	PMID:12771217
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	ZNF148	EXP		Human	PMID:9685330
Biological Process	GO:0000122	negative regulation of transcription by RNA polymerase II	Zfp148	IDA		Rat	PMID:8943318|RGD:61784
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	Zfp148	IDA		Mouse	PMID:9030551
Biological Process	GO:0065003	protein-containing complex assembly	Zfp148	IMP		Rat	PMID:8943318|RGD:61784
Biological Process	GO:0021762	substantia nigra development	ZNF148	HEP		Human	PMID:22926577

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern