Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZNF598
  • Mouse genes Zfp598
  • Rat genes Zfp598
  • Zfish genes znf598
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zfp598

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ZNF598	IPI	UniProtKB:P23396	Human	PMID:28065601
Molecular Function	GO:0005515	protein binding	ZNF598	IPI	UniProtKB:P46783	Human	PMID:28065601
Molecular Function	GO:0005515	protein binding	ZNF598	IPI	UniProtKB:P60866	Human	PMID:28065601
Molecular Function	GO:0005515	protein binding	ZNF598	IPI	UniProtKB:P23396	Human	PMID:28132843
Molecular Function	GO:0005515	protein binding	ZNF598	IPI	UniProtKB:P46783	Human	PMID:28132843
Molecular Function	GO:0005515	protein binding	ZNF598	IPI	UniProtKB:P60866	Human	PMID:28132843
Molecular Function	GO:0043022	ribosome binding	ZNF598	IDA		Human	PMID:28065601
Molecular Function	GO:0043022	ribosome binding	ZNF598	IDA		Human	PMID:28132843
Molecular Function	GO:0003723	RNA binding	ZNF598	HDA		Human	PMID:22658674
Molecular Function	GO:0003723	RNA binding	ZNF598	HDA		Human	PMID:22681889
Molecular Function	GO:0061630	ubiquitin protein ligase activity	ZNF598	IDA		Human	PMID:28065601
Molecular Function	GO:0061630	ubiquitin protein ligase activity	ZNF598	IMP		Human	PMID:28132843
Cellular Component	GO:0005829	cytosol	ZNF598	IDA		Human	PMID:28757607
Biological Process	GO:0006513	protein monoubiquitination	ZNF598	IDA		Human	PMID:28065601
Biological Process	GO:0016567	protein ubiquitination	ZNF598	IMP		Human	PMID:28132843
Biological Process	GO:0072344	rescue of stalled ribosome	ZNF598	IDA		Human	PMID:28065601
Biological Process	GO:0072344	rescue of stalled ribosome	ZNF598	IMP		Human	PMID:28132843
Biological Process	GO:0072344	rescue of stalled ribosome	ZNF598	IMP		Human	PMID:32099016
Biological Process	GO:1990116	ribosome-associated ubiquitin-dependent protein catabolic process	ZNF598	IMP		Human	PMID:32099016

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern