Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZNF300,ZNF486,ZNF506,ZNF679,ZNF722,ZNF735
  • Mouse genes Zfp982
  • Rat genes LOC500584,LOC691254,RGD1565622
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zfp982

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0001228	DNA-binding transcription activator activity, RNA polymerase II-specific	ZNF300	IDA		Human	PMID:20585888
Molecular Function	GO:0005515	protein binding	ZNF679	IPI	UniProtKB:Q99750	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	ZNF679	IPI	UniProtKB:P60370	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZNF679	IPI	UniProtKB:P60371	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZNF679	IPI	UniProtKB:Q99750	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZNF679	IPI	UniProtKB:Q9BS40	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZNF300	IPI	UniProtKB:Q13263	Human	PMID:23665872
Molecular Function	GO:0043565	sequence-specific DNA binding	ZNF300	IDA		Human	PMID:20585888
Cellular Component	GO:0070062	extracellular exosome	ZNF486	HDA		Human	PMID:19056867
Cellular Component	GO:0016604	nuclear body	ZNF300	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005730	nucleolus	ZNF506	IDA		Human	GO_REF:0000054
Cellular Component	GO:0005730	nucleolus	ZNF300	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005654	nucleoplasm	ZNF300	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005634	nucleus	ZNF300	IDA		Human	PMID:23665872
Biological Process	GO:0045944	positive regulation of transcription by RNA polymerase II	ZNF300	IDA		Human	PMID:20585888

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern