Comparative GO Graph (mouse, human, rat)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZG16
  • Mouse genes Zg16
  • Rat genes Zg16
  • Zfish genes
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zg16

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0042834	peptidoglycan binding	Zg16	IDA		Mouse	PMID:27849619
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:O43765	Human	PMID:16189514
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:P0C045	Human	PMID:16237761
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q9UMX0	Human	PMID:16713569
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:O43765	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q9UHX1	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q9UMX0	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q9UMX0-2	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:O43765	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q12797-6	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q7KZS0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q8IVS8	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q96EQ0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q9UHD9	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q9UHX1-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q9UI47-2	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q9UMX0	Human	PMID:32296183
Molecular Function	GO:0005515	protein binding	ZG16	IPI	UniProtKB:Q9Y2W7	Human	PMID:32296183
Cellular Component	GO:0062023	collagen-containing extracellular matrix	ZG16	IDA		Human	PMID:17307141
Cellular Component	GO:0005796	Golgi lumen	ZG16	IDA		Human	PMID:17307141
Cellular Component	GO:0070701	mucus layer	Zg16	IDA		Mouse	PMID:27849619
Cellular Component	GO:0042589	zymogen granule membrane	Zg16	IDA		Rat	PMID:10648640|RGD:727222
Biological Process	GO:0001816	cytokine production	Zg16	IMP	MGI:MGI:3529206	Mouse	PMID:27849619
Biological Process	GO:0050830	defense response to Gram-positive bacterium	Zg16	IMP	MGI:MGI:3529206	Mouse	PMID:27849619
Biological Process	GO:0032633	interleukin-4 production	Zg16	IMP	MGI:MGI:3529206	Mouse	PMID:27849619
Biological Process	GO:0032635	interleukin-6 production	Zg16	IMP	MGI:MGI:3529206	Mouse	PMID:27849619
Biological Process	GO:0052373	suppression of symbiont entry into host	Zg16	IMP	MGI:MGI:3529206	Mouse	PMID:27849619
Biological Process	GO:0032640	tumor necrosis factor production	Zg16	IMP	MGI:MGI:3529206	Mouse	PMID:27849619
Biological Process	GO:0032609	type II interferon production	Zg16	IMP	MGI:MGI:3529206	Mouse	PMID:27849619

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern