Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes ZMAT3
  • Mouse genes Zmat3
  • Rat genes Zmat3
  • Zfish genes zmat3
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set Zmat3

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0005515	protein binding	ZMAT3	IPI	UniProtKB:P22626	Human	PMID:18519039
Molecular Function	GO:0005515	protein binding	ZMAT3	IPI	UniProtKB:Q08211	Human	PMID:18519039
Molecular Function	GO:0005515	protein binding	ZMAT3	IPI	UniProtKB:Q9UKV8	Human	PMID:23085987
Molecular Function	GO:0005515	protein binding	ZMAT3	IPI	UniProtKB:O75569	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZMAT3	IPI	UniProtKB:O95793	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZMAT3	IPI	UniProtKB:Q8IUQ4	Human	PMID:25416956
Molecular Function	GO:0005515	protein binding	ZMAT3	IPI	UniProtKB:Q15633	Human	PMID:32296183
Molecular Function	GO:0003723	RNA binding	ZMAT3	HDA		Human	PMID:22658674
Cellular Component	GO:0005730	nucleolus	Zmat3	IDA		Rat	PMID:9250682|RGD:633665
Cellular Component	GO:0005654	nucleoplasm	ZMAT3	IDA		Human	GO_REF:0000052
Cellular Component	GO:0005886	plasma membrane	ZMAT3	IDA		Human	GO_REF:0000052
Biological Process	GO:0043065	positive regulation of apoptotic process	Zmat3	IDA		Rat	PMID:9250682|RGD:633665

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern