Comparative GO Graph (mouse, human, rat, zebrafish)

• Source: Alliance of Genome Resources

Graphs for Molecular Function, Cellular Component, Biological Process generated Fri Mar 10 16:36:22 2023.

Complete table of the annotations represented in this image is provided below.

Graphs display curated GO classifications for mouse, human, rat and zebrafish orthologs annotated from the biomedical literature.

• This class contains
  • Human genes MT-CYB
  • Mouse genes mt-Cytb
  • Rat genes Mt-cyb
  • Zfish genes mt-cyb
• Annotations are indicated with nodes colored by organism: Human, Mouse, Rat, Zfish
• Relations between GO terms are indicated by colored edges "is_a"; "part_of"; "regulates"; "positively_regulates"; "negatively_regulates"
• GO annotations: Human from GOA; Mouse from MGI; Rat from RGD; Zebrafish from ZFIN.
• Only experimental annotations are displayed: EXP, IDA, IEP, IGI, IMP, IPI, HTP, HDA, HMP, HGI, HEP. Evidence codes are listed at the bottom of the page.

Molecular Function

Cellular Component

Biological Process

Full set of experimental annotations for Human-Rat-Zebrafish genes considered orthologs of Mouse in the Alliance stringent orthology set mt-Cytb

Category	ID	Classification term	Gene	Evidence	Inferred from	Organism	Reference
Molecular Function	GO:0044877	protein-containing complex binding	Mt-cyb	IPI	RGD:1306597	Rat	PMID:6263624|RGD:2298982
Cellular Component	GO:0016020	membrane	mt-Cytb	IDA		Mouse	PMID:8030757
Cellular Component	GO:0005743	mitochondrial inner membrane	mt-Cytb	IDA		Mouse	MGI:MGI:5795833|PMID:6326133
Cellular Component	GO:0005743	mitochondrial inner membrane	Mt-cyb	IDA		Rat	PMID:6263624|RGD:2298982
Cellular Component	GO:0005743	mitochondrial inner membrane	Mt-cyb	IDA		Rat	PMID:6326133|RGD:11535111
Cellular Component	GO:0005750	mitochondrial respiratory chain complex III	MT-CYB	IPI		Human	PMID:28844695
Cellular Component	GO:0005739	mitochondrion	MT-CYB	HDA		Human	PMID:20833797
Cellular Component	GO:0005739	mitochondrion	mt-Cytb	HDA		Mouse	PMID:18614015
Cellular Component	GO:0005739	mitochondrion	mt-Cytb	IDA		Mouse	PMID:16120479
Cellular Component	GO:0005739	mitochondrion	Mt-cyb	IDA		Rat	PMID:15698621|RGD:2298956
Cellular Component	GO:0032991	protein-containing complex	Mt-cyb	IDA		Rat	PMID:6263624|RGD:2298982
Biological Process	GO:0031100	animal organ regeneration	Mt-cyb	IEP		Rat	PMID:9501001|RGD:2298959
Biological Process	GO:0015990	electron transport coupled proton transport	Mt-cyb	IMP		Rat	PMID:6293466|RGD:2298980
Biological Process	GO:0042538	hyperosmotic salinity response	Mt-cyb	IMP		Rat	PMID:8954095|RGD:634225
Biological Process	GO:0046686	response to cadmium ion	Mt-cyb	IDA		Rat	PMID:8269544|RGD:2298966
Biological Process	GO:0051592	response to calcium ion	Mt-cyb	IDA		Rat	PMID:2313294|RGD:2298971
Biological Process	GO:0033590	response to cobalamin	Mt-cyb	IEP		Rat	PMID:7508436|RGD:2298965
Biological Process	GO:0046688	response to copper ion	Mt-cyb	IEP		Rat	PMID:10535524|RGD:2298958
Biological Process	GO:0045471	response to ethanol	Mt-cyb	IEP		Rat	PMID:6263903|RGD:2298981
Biological Process	GO:0033762	response to glucagon	Mt-cyb	IDA		Rat	PMID:6322776|RGD:2298977
Biological Process	GO:0009408	response to heat	Mt-cyb	IEP		Rat	PMID:2372558|RGD:2298970
Biological Process	GO:0009725	response to hormone	Mt-cyb	IEP		Rat	PMID:6215275|RGD:2298979
Biological Process	GO:0055093	response to hyperoxia	Mt-cyb	IEP		Rat	PMID:18481000|RGD:2298955
Biological Process	GO:0001666	response to hypoxia	Mt-cyb	IEP		Rat	PMID:8333494|RGD:2298968
Biological Process	GO:0046689	response to mercury ion	Mt-cyb	IMP		Rat	PMID:8512585|RGD:2298969
Biological Process	GO:0007584	response to nutrient	Mt-cyb	IEP		Rat	PMID:5954822|RGD:2298983
Biological Process	GO:0014070	response to organic cyclic compound	Mt-cyb	IEP		Rat	PMID:15207643|RGD:2298957
Biological Process	GO:0010243	response to organonitrogen compound	Mt-cyb	IEP		Rat	PMID:9425749|RGD:2298960
Biological Process	GO:0009636	response to toxic substance	Mt-cyb	IEP		Rat	PMID:7482592|RGD:2298964
Biological Process	GO:0009410	response to xenobiotic stimulus	Mt-cyb	IEP		Rat	PMID:8838689|RGD:2298963

Gene Ontology Evidence Code Abbreviations:

  EXP Inferred from experiment

  IDA Inferred from direct assay

  IEP Inferred from expression pattern

  IGI Inferred from genetic interaction

  IMP Inferred from mutant phenotype

  IPI Inferred from physical interaction

  HTP Inferred from High Throughput Experiment

  HDA Inferred from High Throughput Direct Assay

  HMP Inferred from High Throughput Mutant Phenotype

  HGI Inferred from High Throughput Genetic Interaction

  HEP Inferred from High Throughput Expression Pattern