Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CXXC5	HGNC:26943 (HGNC) 51523 (Entrez Gene) 612752 (OMIM) CXXC5 (Alliance of Genome Resources)	Chr5 q31.2	Chr5:139647299-139683882 (+) GRCh38		Q7LFL8 (UniProt | EBI) NM_001317205 (RefSeq)
mouse	Cxxc5	MGI:1914643 (MGI) 67393 (Entrez Gene) Gene Tree Cxxc5 (Alliance of Genome Resources)	Chr18 19.26 cM	Chr18:35962450-35994741 (+) GRCm39		ENSMUSG00000046668 (Ensembl Gene Model) ENSMUSP00000054307 (Ensembl) ENSMUST00000060722 (Ensembl)
rat	Cxxc5	RGD:1359466 (Rat Genome Database) 291670 (Entrez Gene) Cxxc5 (Alliance of Genome Resources)	Chr18 p11			Q5XIQ3 (UniProt | EBI) NM_001007628 (RefSeq)
	Cxxc5l1	RGD:1596788 (Rat Genome Database) 681300 (Entrez Gene) Cxxc5l1 (Alliance of Genome Resources)	ChrX q35			XP_006257601 (RefSeq)
zebrafish	cxxc5a	ZDB-GENE-030131-3178 (Zebrafish Model Organism Database) 557911 (Entrez Gene) cxxc5a (Alliance of Genome Resources)	Chr21			XP_009293789 (RefSeq)
	cxxc5b	ZDB-GENE-130225-1 (Zebrafish Model Organism Database) 560916 (Entrez Gene) cxxc5b (Alliance of Genome Resources)	Chr14			XP_021336782 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.