Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CALCOCO1	HGNC:29306 (HGNC) 57658 (Entrez Gene) CALCOCO1 (Alliance of Genome Resources)	Chr12 q13.13	Chr12:53708517-53727745 (-) GRCh38		Q9P1Z2 (UniProt | EBI) NM_001143682 (RefSeq)
mouse	Calcoco1	MGI:1914738 (MGI) 67488 (Entrez Gene) Gene Tree Calcoco1 (Alliance of Genome Resources)	Chr15 57.81 cM	Chr15:102615212-102630613 (-) GRCm39		ENSMUSG00000023055 (Ensembl Gene Model) ENSMUSP00000023818 (Ensembl) ENSMUST00000023818 (Ensembl)
rat	Calcoco1	RGD:619812 (Rat Genome Database) 246047 (Entrez Gene) Calcoco1 (Alliance of Genome Resources)	Chr7 q36			Q66HR5 (UniProt | EBI) NM_139190 (RefSeq)
zebrafish	calcoco1a	ZDB-GENE-030131-6911 (Zebrafish Model Organism Database) 334971 (Entrez Gene) calcoco1a (Alliance of Genome Resources)	Chr23			A2BGD5 (UniProt | EBI) NM_001110166 (RefSeq)
	calcoco1b	ZDB-GENE-031118-126 (Zebrafish Model Organism Database) 386968 (Entrez Gene) calcoco1b (Alliance of Genome Resources)	Chr11			NP_956415 (RefSeq) NM_200121 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.