Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	MSLN	HGNC:7371 (HGNC) 10232 (Entrez Gene) 601051 (OMIM) MSLN (Alliance of Genome Resources)	Chr16 p13.3	Chr16:760734-768865 (+) GRCh38	ovarian cancer pancreas disease pancreatic cancer pancreatic ductal carcinoma	Q13421 (UniProt | EBI) NM_013404 (RefSeq)
mouse	Msln	MGI:1888992 (MGI) 56047 (Entrez Gene) Gene Tree Msln (Alliance of Genome Resources)	Chr17 12.85 cM	Chr17:25967587-25973352 (-) GRCm39		56047 (NCBI Gene Model) Q61468 (UniProt | EBI) NM_018857 (RefSeq)
rat	Msln	RGD:69333 (Rat Genome Database) 60333 (Entrez Gene) Msln (Alliance of Genome Resources)	Chr10 q12			Q9ERA7 (UniProt | EBI) NM_031658 (RefSeq)
zebrafish	mslna	ZDB-GENE-120727-9 (Zebrafish Model Organism Database) 799116 (Entrez Gene) mslna (Alliance of Genome Resources)	Chr3			XP_021330389 (RefSeq)
	mslnb	ZDB-GENE-030131-7286 (Zebrafish Model Organism Database) 100330638 (Entrez Gene) mslnb (Alliance of Genome Resources)	Chr1			XP_017212575 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.