Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SP5	HGNC:14529 (HGNC) 389058 (Entrez Gene) 609391 (OMIM) SP5 (Alliance of Genome Resources)	Chr2 q31.1	Chr2:170715337-170718078 (+) GRCh38		Q6BEB4 (UniProt | EBI) NM_001003845 (RefSeq)
mouse	Sp5	MGI:1927715 (MGI) 64406 (Entrez Gene) Gene Tree Sp5 (Alliance of Genome Resources)	Chr2 41.49 cM	Chr2:70305267-70308070 (+) GRCm39		64406 (NCBI Gene Model) Q9JHX2 (UniProt | EBI) NM_022435 (RefSeq)
rat	Sp5	RGD:1308499 (Rat Genome Database) 296510 (Entrez Gene) Sp5 (Alliance of Genome Resources)	Chr3 q22			NP_001100022 (RefSeq) NM_001106552 (RefSeq)
zebrafish	sp5a	ZDB-GENE-030430-2 (Zebrafish Model Organism Database) 353154 (Entrez Gene) sp5a (Alliance of Genome Resources)	Chr9			NP_851304 (RefSeq) NM_180973 (RefSeq)
	sp5b	ZDB-GENE-131231-1 (Zebrafish Model Organism Database) 799504 (Entrez Gene) sp5b (Alliance of Genome Resources)	Chr6			XP_005172147 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.