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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, human, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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human GBP4 HGNC:20480 (HGNC)
115361 (Entrez Gene)
612466 (OMIM)
GBP4 (Alliance of Genome Resources)
Chr1 p22.2 Chr1:89181144-89198942 (-)
GRCh38
Q96PP9 (UniProt | EBI)
NM_052941 (RefSeq)
GBP7 HGNC:29606 (HGNC)
388646 (Entrez Gene)
612468 (OMIM)
GBP7 (Alliance of Genome Resources)
Chr1 p22.2 Chr1:89131742-89176009 (-)
GRCh38
Q8N8V2 (UniProt | EBI)
NM_207398 (RefSeq)
mouse Gbp3 MGI:1926263 (MGI)
55932 (Entrez Gene)
Gene Tree
Gbp3 (Alliance of Genome Resources)
Chr3 66.69 cM Chr3:142265787-142278970 (+)
GRCm39
ENSMUSG00000028268 (Ensembl Gene Model)
ENSMUSP00000101828 (Ensembl)
ENSMUST00000106221 (Ensembl)
rat Gbp4 RGD:1310579 (Rat Genome Database)
310917 (Entrez Gene)
Gbp4 (Alliance of Genome Resources)
Chr2 q44 NP_001292190 (RefSeq)
NM_001305261 (RefSeq)
zebrafish gbp1 ZDB-GENE-040718-32 (Zebrafish Model Organism Database)
436615 (Entrez Gene)
gbp1 (Alliance of Genome Resources)
Chr2 NP_001002343 (RefSeq)
NM_001002343 (RefSeq)
gbp2 ZDB-GENE-070912-618 (Zebrafish Model Organism Database)
570622 (Entrez Gene)
gbp2 (Alliance of Genome Resources)
Chr2 XP_699217 (RefSeq)
gbp3 ZDB-GENE-070912-176 (Zebrafish Model Organism Database)
563072 (Entrez Gene)
gbp3 (Alliance of Genome Resources)
Chr2 NP_001410166 (RefSeq)
NM_001423237 (RefSeq)
si:ch211-209n20.1 ZDB-GENE-070705-98 (Zebrafish Model Organism Database)
100149641 (Entrez Gene)
si:ch211-209n20.1 (Alliance of Genome Resources)
Chr4 XP_009298801 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory