Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	JPH1	HGNC:14201 (HGNC) 56704 (Entrez Gene) 605266 (OMIM) JPH1 (Alliance of Genome Resources)	Chr8 q21.11	Chr8:74234700-74321540 (-) GRCh38	Charcot-Marie-Tooth disease axonal type 2K	Q9HDC5 (UniProt | EBI) NM_001363050 (RefSeq)
mouse	Jph1	MGI:1891495 (MGI) 57339 (Entrez Gene) Gene Tree Jph1 (Alliance of Genome Resources)	Chr1 5.17 cM	Chr1:17034784-17168113 (-) GRCm39		ENSMUSG00000042686 (Ensembl Gene Model) ENSMUSP00000039072 (Ensembl) ENSMUST00000038382 (Ensembl)
rat	Jph1	RGD:1308789 (Rat Genome Database) 297748 (Entrez Gene) Jph1 (Alliance of Genome Resources)	Chr5 q11			NP_001100100 (RefSeq) NM_001106630 (RefSeq)
zebrafish	jph1a	ZDB-GENE-040724-233 (Zebrafish Model Organism Database) 100147894 (Entrez Gene) jph1a (Alliance of Genome Resources)	Chr24			NP_001159728 (RefSeq) NM_001166256 (RefSeq)
	jph1b	ZDB-GENE-060616-389 (Zebrafish Model Organism Database) 556485 (Entrez Gene) jph1b (Alliance of Genome Resources)	Chr2			NP_001037813 (RefSeq) NM_001044348 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.