Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	HMGB3	HGNC:5004 (HGNC) 3149 (Entrez Gene) 300193 (OMIM) HMGB3 (Alliance of Genome Resources)	ChrX q28	ChrX:150980507-150990771 (+) GRCh38	syndromic microphthalmia 13	O15347 (UniProt | EBI) NM_005342 (RefSeq)
mouse	Hmgb3	MGI:1098219 (MGI) 15354 (Entrez Gene) Gene Tree Hmgb3 (Alliance of Genome Resources)	ChrX 36.92 cM	ChrX:70599523-70604261 (+) GRCm39		15354 (NCBI Gene Model) O54879 (UniProt | EBI) NM_001293623 (RefSeq)
rat	Hmgb3	RGD:1564407 (Rat Genome Database) 305373 (Entrez Gene) Hmgb3 (Alliance of Genome Resources)	ChrX			NP_001166812 (RefSeq) NM_001173341 (RefSeq)
zebrafish	hmgb3a	ZDB-GENE-050428-1 (Zebrafish Model Organism Database) 561025 (Entrez Gene) hmgb3a (Alliance of Genome Resources)	Chr7			NP_001116308 (RefSeq) NM_001122836 (RefSeq)
	hmgb3b	ZDB-GENE-050417-290 (Zebrafish Model Organism Database) 550466 (Entrez Gene) hmgb3b (Alliance of Genome Resources)	Chr21			NP_001017769 (RefSeq) NM_001017769 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.