Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CALD1	HGNC:1441 (HGNC) 800 (Entrez Gene) 114213 (OMIM) CALD1 (Alliance of Genome Resources)	Chr7 q33	Chr7:134744252-134970729 (+) GRCh38		Q05682 (UniProt | EBI) NM_004342 (RefSeq)
mouse	Cald1	MGI:88250 (MGI) 109624 (Entrez Gene) Gene Tree Cald1 (Alliance of Genome Resources)	Chr6 15.07 cM	Chr6:34575433-34752404 (+) GRCm39		109624 (NCBI Gene Model) NP_001334029 (RefSeq) NM_001347100 (RefSeq)
rat	Cald1	RGD:2256 (Rat Genome Database) 25687 (Entrez Gene) Cald1 (Alliance of Genome Resources)	Chr4 q22			Q62736 (UniProt | EBI) NM_001398578 (RefSeq)
zebrafish	cald1a	ZDB-GENE-030131-1629 (Zebrafish Model Organism Database) 322909 (Entrez Gene) cald1a (Alliance of Genome Resources)	Chr4			NP_001108355 (RefSeq) NM_001114883 (RefSeq)
	cald1b	ZDB-GENE-090313-229 (Zebrafish Model Organism Database) 563892 (Entrez Gene) cald1b (Alliance of Genome Resources)	Chr25			NP_001307388 (RefSeq) NM_001320459 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.