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Vertebrate Homology
Source
Alliance of Genome Resources

Comparative GO Graph (mouse, rat, zebrafish)  
Alliance Homology Information
Species Symbol Gene Links Genetic Location Genome Coordinates
(mouse and human only)
Associated Human Diseases Sequences
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mouse Gm12253 MGI:3651568 (MGI)
624860 (Entrez Gene)
Gene Tree
Gm12253 (Alliance of Genome Resources)
Chr11 36.19 cM Chr11:58323385-58332448 (+)
GRCm39
624860 (NCBI Gene Model)
NP_001039007 (RefSeq)
NM_001045542 (RefSeq)
rat Lypd8l1 RGD:3683 (Rat Genome Database)
24906 (Entrez Gene)
Lypd8l1 (Alliance of Genome Resources)
Chr10 q22 O55006 (UniProt | EBI)
NM_031537 (RefSeq)
zebrafish ly6m2 ZDB-GENE-131121-523 (Zebrafish Model Organism Database)
100333489 (Entrez Gene)
ly6m2 (Alliance of Genome Resources)
Chr21 NP_001373263 (RefSeq)
NM_001386334 (RefSeq)
ly6m3 ZDB-GENE-131127-450 (Zebrafish Model Organism Database)
101882858 (Entrez Gene)
ly6m3 (Alliance of Genome Resources)
Chr21
ly6m5 ZDB-GENE-131127-265 (Zebrafish Model Organism Database)
101882984 (Entrez Gene)
ly6m5 (Alliance of Genome Resources)
Chr21 XP_021324603 (RefSeq)
ly6m6 ZDB-GENE-131127-630 (Zebrafish Model Organism Database)
100333430 (Entrez Gene)
ly6m6 (Alliance of Genome Resources)
Chr21 NP_001373255 (RefSeq)
NM_001386326 (RefSeq)
ly6m7 ZDB-GENE-131121-290 (Zebrafish Model Organism Database)
101883119 (Entrez Gene)
ly6m7 (Alliance of Genome Resources)
Chr21
negaly6 ZDB-GENE-131121-604 (Zebrafish Model Organism Database)
100334152 (Entrez Gene)
negaly6 (Alliance of Genome Resources)
Chr16 NP_001373337 (RefSeq)
NM_001386408 (RefSeq)
si:dkey-102g19.3 ZDB-GENE-091204-230 (Zebrafish Model Organism Database)
566752 (Entrez Gene)
si:dkey-102g19.3 (Alliance of Genome Resources)
Chr21 NP_001373192 (RefSeq)
NM_001386263 (RefSeq)
Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.


Contributing Projects:
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO)
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last database update
06/12/2024
MGI 6.13
The Jackson Laboratory