Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

 

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SNX29	HGNC:30542 (HGNC) 92017 (Entrez Gene) SNX29 (Alliance of Genome Resources)	Chr16 p13.13-p13.12	Chr16:11976734-12574287 (+) GRCh38		Q8TEQ0 (UniProt | EBI) NM_001009607 (RefSeq)
	SNX29P1	HGNC:31913 (HGNC) 100652781 (Entrez Gene) SNX29P1 (Alliance of Genome Resources)	Chr	Chr16:21349363-21386064 (+) GRCh38		NM_001012391 (RefSeq)
	SNX29P2	HGNC:31914 (HGNC) 440352 (Entrez Gene) SNX29P2 (Alliance of Genome Resources)	Chr16 p11.2	Chr16:29302287-29365059 (+) GRCh38
mouse	Snx29	MGI:1921728 (MGI) 74478 (Entrez Gene) Gene Tree Snx29 (Alliance of Genome Resources)	Chr16 6.46 cM	Chr16:11140772-11573336 (+) GRCm39		ENSMUSG00000071669 (Ensembl Gene Model) ENSMUSP00000138025 (Ensembl) ENSMUST00000180792 (Ensembl)
rat	Snx29	RGD:1596162 (Rat Genome Database) 689142 (Entrez Gene) Snx29 (Alliance of Genome Resources)	Chr10 q11			NP_001102996 (RefSeq) NM_001109526 (RefSeq)
zebrafish	snx29	ZDB-GENE-121105-13 (Zebrafish Model Organism Database) 565513 (Entrez Gene) snx29 (Alliance of Genome Resources)	Chr12			XP_693885 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.