Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	SLC22A9	HGNC:16261 (HGNC) 114571 (Entrez Gene) 607579 (OMIM) SLC22A9 (Alliance of Genome Resources)	Chr11 q12.3	Chr11:63369785-63410294 (+) GRCh38	Lynch syndrome mismatch repair cancer syndrome	Q8IVM8 (UniProt | EBI) NM_080866 (RefSeq)
	SLC22A10	HGNC:18057 (HGNC) 387775 (Entrez Gene) 607580 (OMIM) SLC22A10 (Alliance of Genome Resources)	Chr11 q12.3	Chr11:63268022-63363144 (+) GRCh38		Q63ZE4 (UniProt | EBI) NM_001039752 (RefSeq)
	SLC22A25	HGNC:32935 (HGNC) 387601 (Entrez Gene) 610792 (OMIM) SLC22A25 (Alliance of Genome Resources)	Chr11 q12.3	Chr11:63158437-63243599 (-) GRCh38		Q6T423 (UniProt | EBI) NM_199352 (RefSeq)
mouse	Slc22a27	MGI:3042283 (MGI) 171405 (Entrez Gene) Gene Tree Slc22a27 (Alliance of Genome Resources)	Chr19 5.36 cM	Chr19:7841753-7943392 (-) GRCm39		ENSMUSG00000067656 (Ensembl Gene Model) ENSMUSP00000093991 (Ensembl) ENSMUST00000075619 (Ensembl)
rat	UST4r	RGD:620976 (Rat Genome Database) 171397 (Entrez Gene) UST4r (Alliance of Genome Resources)	Chr1 q43			NP_599206 (RefSeq) NM_134379 (RefSeq)
	Ust5r	RGD:620985 (Rat Genome Database) 171398 (Entrez Gene) Ust5r (Alliance of Genome Resources)	Chr1 q43			NP_599207 (RefSeq) NM_134380 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.