Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	CAVIN1	HGNC:9688 (HGNC) 284119 (Entrez Gene) 603198 (OMIM) CAVIN1 (Alliance of Genome Resources)	Chr17 q21.2	Chr17:42402449-42423256 (-) GRCh38	congenital generalized lipodystrophy type 4	Q6NZI2 (UniProt | EBI) NM_012232 (RefSeq)
mouse	Cavin1	MGI:1277968 (MGI) 19285 (Entrez Gene) Gene Tree Cavin1 (Alliance of Genome Resources)	Chr11 63.95 cM	Chr11:100847562-100861443 (-) GRCm39	congenital generalized lipodystrophy type 4 pulmonary hypertension	19285 (NCBI Gene Model) O54724 (UniProt | EBI) NM_008986 (RefSeq)
rat	Cavin1	RGD:1307685 (Rat Genome Database) 287710 (Entrez Gene) Cavin1 (Alliance of Genome Resources)	Chr10 q31			P85125 (UniProt | EBI) NM_001105841 (RefSeq)
zebrafish	cavin1a	ZDB-GENE-091204-151 (Zebrafish Model Organism Database) 557070 (Entrez Gene) cavin1a (Alliance of Genome Resources)	Chr3			XP_001920702 (RefSeq)
	cavin1b	ZDB-GENE-030131-5509 (Zebrafish Model Organism Database) 561082 (Entrez Gene) cavin1b (Alliance of Genome Resources)	Chr24			NP_001108021 (RefSeq) NM_001114549 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.