Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	UBAP1	HGNC:12461 (HGNC) 51271 (Entrez Gene) 609787 (OMIM) UBAP1 (Alliance of Genome Resources)	Chr9 p13.3	Chr9:34179005-34252523 (+) GRCh38	hereditary spastic paraplegia 80	Q9NZ09 (UniProt | EBI) NM_016525 (RefSeq)
mouse	Ubap1	MGI:2149543 (MGI) 67123 (Entrez Gene) Gene Tree Ubap1 (Alliance of Genome Resources)	Chr4 21.43 cM	Chr4:41348996-41389766 (+) GRCm39	hereditary spastic paraplegia 80	67123 (NCBI Gene Model) Q8BH48 (UniProt | EBI) NM_001355508 (RefSeq)
rat	Ubap1	RGD:1305186 (Rat Genome Database) 362502 (Entrez Gene) Ubap1 (Alliance of Genome Resources)	Chr5 q22			Q5XIS7 (UniProt | EBI) NM_001012190 (RefSeq)
zebrafish	ubap1	ZDB-GENE-040426-950 (Zebrafish Model Organism Database) 393183 (Entrez Gene) ubap1 (Alliance of Genome Resources)	Chr21			F6P6X0 (UniProt | EBI) NM_200214 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.