Vertebrate Homology

• Source: Alliance of Genome Resources

Multiple Genome Viewer

Comparative GO Graph (mouse, human, rat, zebrafish)  

Alliance Homology Information

Species	Symbol	Gene Links	Genetic Location	Genome Coordinates (mouse and human only)	Associated Human Diseases	Sequences
human	COL6A6	HGNC:27023 (HGNC) 131873 (Entrez Gene) 616613 (OMIM) COL6A6 (Alliance of Genome Resources)	Chr3 q22.1	Chr3:130516720-130677044 (+) GRCh38		A6NMZ7 (UniProt | EBI) NM_001102608 (RefSeq)
mouse	Col6a6	MGI:2444259 (MGI) 245026 (Entrez Gene) Gene Tree Col6a6 (Alliance of Genome Resources)	Chr9 56.99 cM	Chr9:105566616-105705413 (-) GRCm39		245026 (NCBI Gene Model) Q8C6K9 (UniProt | EBI) NM_001102607 (RefSeq)
rat	Col6a6	RGD:1309172 (Rat Genome Database) 315979 (Entrez Gene) Col6a6 (Alliance of Genome Resources)	Chr8 q32			XP_038938537 (RefSeq)
zebrafish	col6a4a	ZDB-GENE-041111-303 (Zebrafish Model Organism Database) 564005 (Entrez Gene) col6a4a (Alliance of Genome Resources)	Chr16			XP_017207020 (RefSeq)

Alliance Homology Information

MGI loads orthology data based on the 'stringent' set from the Alliance of Genome Resources. The Alliance sets are based on a scoring system developed by the Alliance in collaboration with DIOPT.

MGI includes orthology for the following vertebrate species from the Alliance:
 - human
 - mouse
 - rat
 - zebrafish

These are a subset of the total species represented in the Alliance; there may be stringent set orthologs in other Alliance species.